Gene
| Gene Model ID | pfu_aug2.0_90.1_00216 |
|---|---|
| Locus | scaffold90.1 : 346229 ... 352145 : - |
| To GenomeBrowser | scaffold90.1:346229..352145 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00216.t1 | 1 | 1 | LURAP | 60 | 133 | 6.9e-08 | 32.2 | 7.5e-12 | 1.1e-07 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00216.t1 | gi|676449865|ref|XP_009052192.1| | hypothetical protein LOTGIDRAFT_174601 [Lottia gigantea] | 6.0e-12 |
| pfu_aug2.0_90.1_00216.t1 | gi|676449855|ref|XP_009052189.1| | hypothetical protein LOTGIDRAFT_174598 [Lottia gigantea] | 4.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00216.t1 atgtcttgcaatcggctctcaacgctcagtgtagtagatggacatgataagtacacagagagcattgacttttctaatgc atgtagggaattttacatgaatagagtgaaagctacggagaacttcaagaagcaaatgaatgcatgctctggaagcgagg aaaagccagcacctgaagttccaaagaagaaatcatcaatacagtctgccatggataaactgagaacagaaatggtttct ctaatggaccaagatttgtgcctgatgcgacaacttcttaccctgaatgaagccatagaagacattaaaaccaaacgtct gtacggtatgagtaagaattccctgcacgctgattccagggacatgagcgccagtgagtggtctttatcagacaccgatc tgtatgcatcagacgcagacatcgaaaaatcagccaaccagacacttgaaacacagaaagatacttcaattccagttcca aaatcaacaacagagtcaaactttgtgaaaacagacattttagtgaatggaaaaccgttacattgtgtccatggagttca aaggtcgatagactctggatacgacgagtcggatacttaccaaacggatattgaagtttcattntctgtacggtatgagt aa |
|
Protein
| Protein ID | pfu_aug2.0_90.1_00216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00216.t1 MSCNRLSTLSVVDGHDKYTESIDFSNACREFYMNRVKATENFKKQMNACSGSEEKPAPEVPKKKSSIQSAMDKLRTEMVS LMDQDLCLMRQLLTLNEAIEDIKTKRLYGMSKNSLHADSRDMSASEWSLSDTDLYASDADIEKSANQTLETQKDTSIPVP KSTTESNFVKTDILVNGKPLHCVHGVQRSIDSGYDESDTYQTDIEVSXSVRYE |
|