Gene
| Gene Model ID | pfu_aug2.0_90.1_00220 |
|---|---|
| Locus | scaffold90.1 : 380294 ... 385490 : + |
| To GenomeBrowser | scaffold90.1:380294..385490 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | pfu_aug1.0_1755.1_00829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00220.t1 | 1 | 1 | NAD_Gly3P_dh_N | 9 | 120 | 1.0e-06 | 28.5 | 1.4e-09 | 3.1e-06 | 27.0 |
| pfu_aug2.0_90.1_00220.t1 | 1 | 1 | Octopine_DH | 200 | 371 | 6.29996e-41 | 139.5 | 3.92364e-44 | 8.30003e-41 | 139.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00220.t1 | gi|676422221|ref|XP_009043927.1| | hypothetical protein LOTGIDRAFT_202998 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_90.1_00220.t1 | gi|156402750|ref|XP_001639753.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_90.1_00220.t1 | gi|156402748|ref|XP_001639752.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_90.1_00220.t1 | gi|676462715|ref|XP_009056359.1| | hypothetical protein LOTGIDRAFT_202584 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_90.1_00220.t1 | gi|514700004|ref|XP_004997570.1| | hypothetical protein PTSG_01589 [Salpingoeca rosetta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00220.t1 atgaccctggataagaaagttcagatactagtttgtggtggagggaatggtgcccactgtctagcagggttggccagctt acggccaaatgcagaggttagtgtcctaacgctatatgctgacgaggcagagcgatggacaaaggtcctggtcgacaaaa aacttaaaattagcgtcacatataacgacggaactaacggtgaattagaatccaggccaaaactcatcacgaaggatccc gcttcggttgtacccaatgctgatatcatattcatggtggtacctgcttttgcgcaccaacaatatcttacggaaattgc aaaacacatcaaagacaacacggtcatcgtgggattaccaggacaagcgggtttcgaattccaatgtttaagtattctgg gaaacaaagccaaaacatgtgctgtctcttcgtttgagtctctgccttgggcgtgtcgtattttggaatttgggtgtcat gttcaaatcttagggtttaaggaatctctgggagcagcactccttcaaggtagtcagtgcactctgtcagctccagcatt cgatacaatccaatggatccttggggagaaaccaaaaatcaaacccatacagaactatatcgcggtgaacttgatggcaa aatcaataattcatcctccgctcatgtatggtcaatggagtaaatggaacggtcagtcattggatgagaagcctctattc tatcaaggagtagatgacctgcaggcatccctactgtcaaaggtcagtgatgaagtggtggccacggccaaagcgatcga acagcagcgtagcggcatagacatgaaggatgttatacacatcctggactggtacaaagagtattatcgtgaccaggtga cagatagcagtaatctgatgaaagccatgcagacaaacaaggcgtatgacggcttgctccaccctatgaaacccgcgggg gacgggaagtacgcacccgatttctcataccgctacacggcagaggacgtaccattcggtctagtggttatgaagggcat cgctcagattgccggggtggccacgccagtcatggatgaagtgatcacgtgggcacagggcaagctgggtaaggaatacc tggttggctctgaactaaagggaaaagacctaccctcctcccgggcgccgcaaagctacaacttccataccctagatgat ttgttcaatgtatga |
|
Protein
| Protein ID | pfu_aug2.0_90.1_00220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00220.t1 MTLDKKVQILVCGGGNGAHCLAGLASLRPNAEVSVLTLYADEAERWTKVLVDKKLKISVTYNDGTNGELESRPKLITKDP ASVVPNADIIFMVVPAFAHQQYLTEIAKHIKDNTVIVGLPGQAGFEFQCLSILGNKAKTCAVSSFESLPWACRILEFGCH VQILGFKESLGAALLQGSQCTLSAPAFDTIQWILGEKPKIKPIQNYIAVNLMAKSIIHPPLMYGQWSKWNGQSLDEKPLF YQGVDDLQASLLSKVSDEVVATAKAIEQQRSGIDMKDVIHILDWYKEYYRDQVTDSSNLMKAMQTNKAYDGLLHPMKPAG DGKYAPDFSYRYTAEDVPFGLVVMKGIAQIAGVATPVMDEVITWAQGKLGKEYLVGSELKGKDLPSSRAPQSYNFHTLDD LFNV |
|