Gene
| Gene Model ID | pfu_aug2.0_90.1_00224 |
|---|---|
| Locus | scaffold90.1 : 429675 ... 432313 : - |
| To GenomeBrowser | scaffold90.1:429675..432313 |
| Genes list of scaffold | scaffold90.1 |
| Synonym | pfu_aug1.0_1755.1_00833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_90.1_00224.t1 | 2 | 1 | Reeler | 39 | 175 | 4.0e-10 | 40.0 | 4.6e-14 | 6.9e-10 | 39.2 |
| pfu_aug2.0_90.1_00224.t1 | 2 | 2 | Reeler | 188 | 207 | 4.0e-10 | 40.0 | 0.23 | 3400.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_90.1_00224.t1 | gi|379698936|ref|NP_001243939.1| | immune-related protein 2 precursor [Bombyx mori] | 8.0e-08 |
| pfu_aug2.0_90.1_00224.t1 | gi|557258731|ref|XP_006015057.1| | PREDICTED: hornerin-like isoform X2 [Alligator sinensis] | 2.0e-06 |
| pfu_aug2.0_90.1_00224.t1 | gi|557258729|ref|XP_006015056.1| | PREDICTED: hornerin-like isoform X1 [Alligator sinensis] | 2.0e-06 |
| pfu_aug2.0_90.1_00224.t1 | gi|676482305|ref|XP_009062655.1| | hypothetical protein LOTGIDRAFT_235283 [Lottia gigantea] | 4.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_90.1_00224.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00224.t1 atgaatcttttgacagcagacatgaactcacttttactgttgttgctacatgtttgcgccgcacacaatcatctcagcca tgcagcctatccgaacactctgtcagagcgggaatgccgtaccatgatgccagagtccatacatgtggaacctcaaacaa ccgctcccccatacctgctgggatttaaatcgactatcaaagatggaaaatatgatgacaaacctatcaaagtaaccctg caggcaaagagtaaggagtcccctttacgtgtggtacttatacaggcccatatcgctgactgtgacgacccggagtacta caaagcacaaggagctttccagcatatagacgacttccttcacacaaccaactgtgggaaacgagcaaatagtattgcag ttaataaagtatttaacgatactggaatggttactagaacaagcatagactggtatccctcaaaaggcttcaagaaagac atttacttcagggccactgttggtctggacgataataaagtctggacaaatatcctcagcaaagtcgctcgacacgtgac ttccaaaaggaattccactcaggcaccaaattgcgaaataggaaatagtgcacagcaaagcgtgaagacttctgaaatga caatattattgttttgtttacttgtgctaccaaaactaatatcagatatctcataa |
|
Protein
| Protein ID | pfu_aug2.0_90.1_00224.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_90.1_00224.t1 MNLLTADMNSLLLLLLHVCAAHNHLSHAAYPNTLSERECRTMMPESIHVEPQTTAPPYLLGFKSTIKDGKYDDKPIKVTL QAKSKESPLRVVLIQAHIADCDDPEYYKAQGAFQHIDDFLHTTNCGKRANSIAVNKVFNDTGMVTRTSIDWYPSKGFKKD IYFRATVGLDDNKVWTNILSKVARHVTSKRNSTQAPNCEIGNSAQQSVKTSEMTILLFCLLVLPKLISDIS |
|