Gene
| Gene Model ID | pfu_aug2.0_9005.1_19661 |
|---|---|
| Locus | scaffold9005.1 : 1 ... 7695 : - |
| To GenomeBrowser | scaffold9005.1:1..7695 |
| Genes list of scaffold | scaffold9005.1 |
| Synonym | pfu_aug1.0_3094.1_30337 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9005.1_19661.t1 | 1 | 1 | CHCH | 108 | 141 | 9.0e-09 | 35.0 | 6.0e-12 | 1.5e-08 | 34.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9005.1_19661.t1 | gi|562837870|ref|XP_006148151.1| | PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial isoform X1 [Tupaia chinensis] | 4.0e-37 |
| pfu_aug2.0_9005.1_19661.t1 | gi|562837872|ref|XP_006148152.1| | PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial isoform X2 [Tupaia chinensis] | 5.0e-37 |
| pfu_aug2.0_9005.1_19661.t1 | gi|733915689|ref|XP_010720043.1| | PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial [Meleagris gallopavo] | 6.0e-36 |
| pfu_aug2.0_9005.1_19661.t1 | gi|149725671|ref|XP_001499624.1| | PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial [Equus caballus] | 9.0e-36 |
| pfu_aug2.0_9005.1_19661.t1 | gi|148227746|ref|NP_001085715.1| | coiled-coil-helix-coiled-coil-helix domain containing 2 [Xenopus laevis] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_9005.1_19661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9005.1_19661.t1 atgccacgaagaggaagatcgccttctccacgacccgcaccaagggcgccagcacctccaccccagaccatgccggccca tcctccaccccaagctcccatgatgcaccagcagccacgacaaccgggattgatggctcagatggccaccacagccgctg gtgtagctgtcggatctgcagtgggtcatactatcggagctgccatgacagggggtatgggagggggacaccaccaagag gctcccgccccggcaccacaatatcaggaggcaccacaacaataccagcaaccttaccaacaacagcaacaacaacctgc ttgccagtttgagctgaaacaattcctggattgtacacagaatcagtcagatatctcactgtgtcacggctttaacgagg ctctaaaggaatgcaagatgagatatggtgaagtttactgtacagactgtagatag |
|
Protein
| Protein ID | pfu_aug2.0_9005.1_19661.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9005.1_19661.t1 MPRRGRSPSPRPAPRAPAPPPQTMPAHPPPQAPMMHQQPRQPGLMAQMATTAAGVAVGSAVGHTIGAAMTGGMGGGHHQE APAPAPQYQEAPQQYQQPYQQQQQQPACQFELKQFLDCTQNQSDISLCHGFNEALKECKMRYGEVYCTDCR |
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