Gene
| Gene Model ID | pfu_aug2.0_904.1_14642 |
|---|---|
| Locus | scaffold904.1 : 31783 ... 35505 : - |
| To GenomeBrowser | scaffold904.1:31783..35505 |
| Genes list of scaffold | scaffold904.1 |
| Synonym | pfu_aug1.0_14661.1_46785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_904.1_14642.t1 | 2 | 1 | TatD_DNase | 220 | 398 | 0.0 | 168.0 | 7.9e-27 | 1.7e-23 | 83.1 |
| pfu_aug2.0_904.1_14642.t1 | 2 | 2 | TatD_DNase | 494 | 672 | 0.0 | 168.0 | 1.2e-26 | 2.6e-23 | 82.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_904.1_14642.t1 | gi|392922676|ref|NP_001256781.1| | Y37H2A.1, isoform a [Caenorhabditis elegans] | 3.0e-17 |
| pfu_aug2.0_904.1_14642.t1 | gi|17543026|ref|NP_502188.1| | Y24F12A.1, isoform a [Caenorhabditis elegans] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_904.1_14642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14642.t1 atgaatgcttgccttatacaaacatgcaagtcagctgatcgcaagccccgcagacatgccctgaataaacacttccctgc tgcccttcaagttaaccttgaaagtgagaatgttgaccttggtgtccatattatgatgcttagatggttagtgtctgccg catatggtccaaacaccagtctgtctgatgctgtggattatttaaataattctgaactcataccaagtggaattcaactc aaccccttacatcagactatatttaaggatgcttgcacacttttgggtgttgagtccccatacaaatttgcgctccatcc aataaattcaccagccgtccttctcttttggagatgtaccattgccctcctttcccaatgttcaaccaaggatcagcgag catttaaacatttgaaacctgaggactgcagggtcgttcacctcatctcaacagaacaccctgtatggactcagagttct agtgaggatattcagccgcaagaggaggaagaggtattagaggagtttattgtcattgaagagacgggggaaagtgagga cgaggattgcgaggagtcagtgtctaaaacacttcaagtgtatgacagtcactctcaccggacctgtcaaagaatatgga actcaactgtgggacacacagtggaggatttgatagaatacagtttttctaactgtgtgtcatatcaccccatttgtcag gaccctgaaaagctgctgtgggtgtgcaccctaaacactgctaaacatctagaaaggacactggtattgcagcagttgct aaggcatccgaaggttgcagccctaggcgaatgtggtttagaccgcagagtacctgtttcaaagtggaggtttcaggagg aaattttccagaggatgctgaaacttgcaaaagtggaacaacctctggttttgcaccttaggggacctccaggtgatgaa ctgggatcagacgtccagtgccgcgccatgatcatgatggaggccaattgtaaacctgtccagaagctccatgtccattg tttcacaggggaaaaggacatagtacaagcatggctgctgaaatttcctagttcatattttggtgttactgcagctgtcc gttcatttggcagagagcagatcgatgggctacgggaaattcctataaacagattgctcctggaaacagacgctagggaa attctgagttcagtactccagcctacaatggagaggtcgctggatttgttgcgggtcgttcacctcatctcaacagaaca ccctgtatggactcagagttctagtgaggatattcagccgcaagaggaggaagaggtattagaggagtttattgtcattg aagagacgggggaaagtgaggacgaggattgcgaggagtcagtgtctaaaacacttcaagtgtatgacagtcactctcac cggacctgtcaaagaatatggaactcaactgtgggacacacagtggaggatttgatagaatacagtttttctaactgtgt gtcatatcaccccatttgtcaggaccctgaaaagctgctgtgggtgtgcaccctaaacactgctaaacatctagaaagga cactggtattgcagcagttgctaaggcatccgaaggttgcagccctaggcgaatgtggtttagaccgcagagtacctgtt tcaaagtggaggtttcaggaggaaattttccagaggatgctgaaacttgcaaaagtggaacaacctctggttttgcacct taggggacctccaggtgatgaactgggatcagacgtccagtgccgcgccatgatcatgatggaggccaattgtaaacctg tccagaagctccatgtccattgtttcacaggggaaaaggacatagtacaagcatggctgctgaaatttcctagttcatat tttggtgttactgcagctgtccgttcatttggcagagagcagatcgatgggctacgggaaattcctataaacagattgct cctggaaacagacgctagggaaattctgagttcagtactccagcctacaatggagaggtcgctggatttgttgcggtgca ccttgacaggcgccctgctgaattga |
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Protein
| Protein ID | pfu_aug2.0_904.1_14642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14642.t1 MNACLIQTCKSADRKPRRHALNKHFPAALQVNLESENVDLGVHIMMLRWLVSAAYGPNTSLSDAVDYLNNSELIPSGIQL NPLHQTIFKDACTLLGVESPYKFALHPINSPAVLLFWRCTIALLSQCSTKDQRAFKHLKPEDCRVVHLISTEHPVWTQSS SEDIQPQEEEEVLEEFIVIEETGESEDEDCEESVSKTLQVYDSHSHRTCQRIWNSTVGHTVEDLIEYSFSNCVSYHPICQ DPEKLLWVCTLNTAKHLERTLVLQQLLRHPKVAALGECGLDRRVPVSKWRFQEEIFQRMLKLAKVEQPLVLHLRGPPGDE LGSDVQCRAMIMMEANCKPVQKLHVHCFTGEKDIVQAWLLKFPSSYFGVTAAVRSFGREQIDGLREIPINRLLLETDARE ILSSVLQPTMERSLDLLRVVHLISTEHPVWTQSSSEDIQPQEEEEVLEEFIVIEETGESEDEDCEESVSKTLQVYDSHSH RTCQRIWNSTVGHTVEDLIEYSFSNCVSYHPICQDPEKLLWVCTLNTAKHLERTLVLQQLLRHPKVAALGECGLDRRVPV SKWRFQEEIFQRMLKLAKVEQPLVLHLRGPPGDELGSDVQCRAMIMMEANCKPVQKLHVHCFTGEKDIVQAWLLKFPSSY FGVTAAVRSFGREQIDGLREIPINRLLLETDAREILSSVLQPTMERSLDLLRCTLTGALLN |
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