Gene
| Gene Model ID | pfu_aug2.0_904.1_14647 |
|---|---|
| Locus | scaffold904.1 : 55776 ... 61737 : + |
| To GenomeBrowser | scaffold904.1:55776..61737 |
| Genes list of scaffold | scaffold904.1 |
| Synonym | pfu_aug1.0_7169.1_60196 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| centrin-1-like isoform x1 | GO:0005509 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_904.1_14647.t1 | 1 | 1 | EF-hand_6 | 56 | 79 | 5.9e-07 | 28.8 | 4.1e-10 | 1.0e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_904.1_14647.t1 | gi|557318110|ref|XP_006032250.1| | PREDICTED: centrin-2 [Alligator sinensis] | 2.0e-11 |
| pfu_aug2.0_904.1_14647.t1 | gi|591378929|ref|XP_007064014.1| | PREDICTED: centrin-2-like [Chelonia mydas] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_904.1_14647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14647.t1 atgccggattattctcaggaccagctgctgggactagaaatatatcattttagtccccggaaaaaagatgaaacgaaagc aagctctaagaaggatgcccagcagggcggagggccaaggaaaaaaggaggccctgagttagagcttactgaggaacaga aggcggatctcagggcggcgtttgatttatttgacgatgatggctcagggacaattgacggcaaagatttgaaggacagt acaagtaaatttattccttttgactag |
|
Protein
| Protein ID | pfu_aug2.0_904.1_14647.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14647.t1 MPDYSQDQLLGLEIYHFSPRKKDETKASSKKDAQQGGGPRKKGGPELELTEEQKADLRAAFDLFDDDGSGTIDGKDLKDS TSKFIPFD |
|