Gene
| Gene Model ID | pfu_aug2.0_904.1_14649 |
|---|---|
| Locus | scaffold904.1 : 112897 ... 172495 : - |
| To GenomeBrowser | scaffold904.1:112897..172495 |
| Genes list of scaffold | scaffold904.1 |
| Synonym | pfu_aug1.0_3351.1_59208 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trk-like receptor tyrosine kinase | GO:0004674 GO:0004713 GO:0005524 GO:0009966 GO:0018108 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_904.1_14649.t1 | 2 | 1 | Pkinase_Tyr | 215 | 315 | 0.0 | 379.0 | 3.3e-25 | 8.2e-22 | 77.5 |
| pfu_aug2.0_904.1_14649.t1 | 2 | 1 | Pkinase | 215 | 312 | 0.0 | 213.1 | 2.0e-17 | 5.1e-14 | 52.0 |
| pfu_aug2.0_904.1_14649.t1 | 2 | 2 | Pkinase_Tyr | 336 | 602 | 0.0 | 379.0 | 0.0 | 0.0 | 299.6 |
| pfu_aug2.0_904.1_14649.t1 | 2 | 2 | Pkinase | 336 | 601 | 0.0 | 213.1 | 0.0 | 0.0 | 159.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_904.1_14649.t1 | gi|676452464|ref|XP_009053040.1| | hypothetical protein LOTGIDRAFT_144166, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_904.1_14649.t1 | gi|325297164|ref|NP_001191591.1| | Trk-like receptor tyrosine kinase [Aplysia californica] | 0.0 |
| pfu_aug2.0_904.1_14649.t1 | gi|241151448|ref|XP_002406687.1| | nerve growth factor receptor TRKA, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_904.1_14649.t1 | gi|391346565|ref|XP_003747543.1| | PREDICTED: BDNF/NT-3 growth factors receptor-like [Metaseiulus occidentalis] | 0.0 |
| pfu_aug2.0_904.1_14649.t1 | gi|752861635|ref|XP_011258478.1| | PREDICTED: high affinity nerve growth factor receptor-like isoform X1 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_904.1_14649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14649.t1 atggccatcgatttagaccctgcaaaatttggaacggattttaaatttccatttggtacggatacaatttttgaaacgga cgatgttgaagtacatcccagttctggattggagggtcacaaagaatgcacagacaattcggactgcttggcagatgtgt cgatgtgtatggaaaatccagccaccggaataaagatttgtcactgtatctatgaattaaagcaagcagacatacatgga aactgtagtcaggagaagagtgttgaggaaccgggcgatgacggagtcattcatcatttacctccagtttttgggaagcc aagtcccatgaatatcacatcaaatacgacagacaatgtgccattactaaagcagaacactcacaaagagaaccccttac aaatgctccacgttctgttaccagtctcatttgcattggtattgacttttatcattgccttaattattattcgacgctca caaatttgccggaaaaggaaatccaggaaaggtttccccgtgaaaggccgtgaagatgtgcaattattagatcggatgag cgttgtgaataaaaatccatcctactatatgactttaacgggcaaacagttcccaattaaagagatagacggaaataacg taaaagtccttgatgttgttggagaaggggctttcgggcatgtttacaaaggccttctttgtctacctaatgagagtacg aaagaaatagccatcaaagtgttgaaagagggtgtctccaacgaggtccgtgaggattttgaacgagaagtagagatcat gagttctttcgaccacgataatattttgaaactattgggagttgttacaaaaggatgctgtgaatccccatttatgatat ttgaatacatggaacacggggacctggctgaattgttaaggcgaaatgatccagcgatgagaaaagatgaaaatgttttc aaactaaagaagttcccaattaaagagatagacggaaataacgtaaaagtccttgatgttgttggagaaggggctttcgg gcatgtttacaaaggccttctttgtctacctaatgagagtacgaaagaaatagccatcaaagtgttgaaagagggtgtct ccaacgaggtccgtgaggattttgaacgagaagtagagatcatgagttctttcgaccacgataatattttgaaactattg ggagttgttacaaaaggatgctgtgaatccccatttatgatatttgaatacatggaacacggggacctggctgaattgtt aaggcgaaatgatccagcgatgagaaaagatgaaaatgttttcaaactaaagaagacggatttgatagatatttctatac agatagccacgggtatgacctatctgacgtcacagcattttgtacatagagatttggctaccaggaattgcttagtaggc aatcagctaattgtaaaaatatcagatttcggtatggcccgggatatatacacatgtgattattacaagattggtggatc aagaatgttacctgtaaggtggatgtcacccgagggtatcaaatatggtcaatttaccacagagtctgacatatgggctt ttggagtcgtgttatgggagatcttcagctttgggaggcaaccctactatggtcatgcaaatgaagaggtgatccgattt ttagatgaagggatactgttacagagaccagatgagtgtccatccacagtgtatcacattatgcttgggtgctggaaaag tgatcctaaggagcgccttcacttcaacaggatcctcaagcatcttgtagatttcagcaatgacgtcatgaaaaacgcgc gaattgagaataaaaacgatcacgaggtggacgaacaacttcctgtttag |
|
Protein
| Protein ID | pfu_aug2.0_904.1_14649.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_904.1_14649.t1 MAIDLDPAKFGTDFKFPFGTDTIFETDDVEVHPSSGLEGHKECTDNSDCLADVSMCMENPATGIKICHCIYELKQADIHG NCSQEKSVEEPGDDGVIHHLPPVFGKPSPMNITSNTTDNVPLLKQNTHKENPLQMLHVLLPVSFALVLTFIIALIIIRRS QICRKRKSRKGFPVKGREDVQLLDRMSVVNKNPSYYMTLTGKQFPIKEIDGNNVKVLDVVGEGAFGHVYKGLLCLPNEST KEIAIKVLKEGVSNEVREDFEREVEIMSSFDHDNILKLLGVVTKGCCESPFMIFEYMEHGDLAELLRRNDPAMRKDENVF KLKKFPIKEIDGNNVKVLDVVGEGAFGHVYKGLLCLPNESTKEIAIKVLKEGVSNEVREDFEREVEIMSSFDHDNILKLL GVVTKGCCESPFMIFEYMEHGDLAELLRRNDPAMRKDENVFKLKKTDLIDISIQIATGMTYLTSQHFVHRDLATRNCLVG NQLIVKISDFGMARDIYTCDYYKIGGSRMLPVRWMSPEGIKYGQFTTESDIWAFGVVLWEIFSFGRQPYYGHANEEVIRF LDEGILLQRPDECPSTVYHIMLGCWKSDPKERLHFNRILKHLVDFSNDVMKNARIENKNDHEVDEQLPV |
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