Gene
| Gene Model ID | pfu_aug2.0_906.1_21257 |
|---|---|
| Locus | scaffold906.1 : 61489 ... 67225 : - |
| To GenomeBrowser | scaffold906.1:61489..67225 |
| Genes list of scaffold | scaffold906.1 |
| Synonym | pfu_aug1.0_915.1_43850 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_906.1_21257.t1 | 1 | 1 | PAN_1 | 38 | 91 | 6.0e-06 | 25.9 | 2.9e-09 | 2.1e-05 | 24.1 |
| pfu_aug2.0_906.1_21257.t1 | 2 | 1 | Sushi | 139 | 187 | 2.4e-13 | 50.1 | 2.4e-10 | 1.7e-06 | 28.2 |
| pfu_aug2.0_906.1_21257.t1 | 2 | 2 | Sushi | 199 | 262 | 2.4e-13 | 50.1 | 4.1e-08 | 0.0003 | 21.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_906.1_21257.t1 | gi|241708651|ref|XP_002413339.1| | furrowed, putative [Ixodes scapularis] | 5.0e-12 |
| pfu_aug2.0_906.1_21257.t1 | gi|662198925|ref|XP_008472603.1| | PREDICTED: E-selectin-like [Diaphorina citri] | 8.0e-12 |
| pfu_aug2.0_906.1_21257.t1 | gi|340715485|ref|XP_003396243.1| | 1.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_906.1_21257.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21257.t1 atggccagcaaggatattaaatcatttcttctcttcgtaatattgcattttctttttcgatttgagaaagtgaaatgttc tttgataagtggagatgtgaagagtgctttgttcataggcaaagtactgatggatgtagaaataactacattgacgacac aaagtttggaaaattgtgtacatgaatgtattagacgtccaaggtgcttgtccattaatcataaggccagggttcaacta tgtatattgaactttgacgacagtgagagtaacttgatgacggaaattggatcaatcttttcaccgattgatagatggaa caagtacaatgtaggaagttgttggaataggacaagatgtgacataagcgagcgttgtactgatggaagtagcggaccat gtgaaccatcagattgcggacatcctcctgatgttccaggggcgatgttgacaacaggaaatccggagataggactttat tctaggattgagtacgcatgcttatctggctacactttacatggtatttccacagtaggttgtaagcagagtggggagtg ggcagttgaacgttttaattgcacacatgttgactgtggaagtccgacagtaattagtaatacagaggtacgactactga acggttcgactacatacagaagccaagctgagtattcgtgtgaggaaggtgggatttgtggcgctaaaatgacattagtg aacagtgatcaggcagttgtagaatgtcaggcagatggactgtggtcatcaagcagtgttgaatgcataattgagaatgt tggaatgggtgaatgcacaaacgattcggtcgtgctcgatgttgcttatatacttgatgataccaacagtgtagacgacg gagagttccaagaacagctcggtctattccaaacactttcaatgaggctcaccaacgttaccagttgcgcacgtgtatct gttttcaggcatcataattctttcaatattgactttggctttggttcgtacaacactacgtcggatacatgcaatagcat cggtagccttgttcggagatacggagtaggagatgaggaaatagaagtaacaagctttgctcttggacactttcccgcaa ttgacactcaggagaatcggcaacgtggagttattttggtcgtgtcagaccgtagtggcacaaattggaatagcaatgca ggacgcactgtactagaggcagctgatgacaaaagtatagatgttgtcaccataaaaatgggtggcaaccaacaacaagc atctgacaaccatcatcccattgatgtccctggttcacaggatctagttacgatagccgatgactgcatgacaatcatta caaacgtgtacactagtgttatacagaactaa |
|
Protein
| Protein ID | pfu_aug2.0_906.1_21257.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21257.t1 MASKDIKSFLLFVILHFLFRFEKVKCSLISGDVKSALFIGKVLMDVEITTLTTQSLENCVHECIRRPRCLSINHKARVQL CILNFDDSESNLMTEIGSIFSPIDRWNKYNVGSCWNRTRCDISERCTDGSSGPCEPSDCGHPPDVPGAMLTTGNPEIGLY SRIEYACLSGYTLHGISTVGCKQSGEWAVERFNCTHVDCGSPTVISNTEVRLLNGSTTYRSQAEYSCEEGGICGAKMTLV NSDQAVVECQADGLWSSSSVECIIENVGMGECTNDSVVLDVAYILDDTNSVDDGEFQEQLGLFQTLSMRLTNVTSCARVS VFRHHNSFNIDFGFGSYNTTSDTCNSIGSLVRRYGVGDEEIEVTSFALGHFPAIDTQENRQRGVILVVSDRSGTNWNSNA GRTVLEAADDKSIDVVTIKMGGNQQQASDNHHPIDVPGSQDLVTIADDCMTIITNVYTSVIQN |
|