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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_91.1_03592
Locus scaffold91.1 : 263344 ... 268313 : -
To GenomeBrowser scaffold91.1:263344..268313
Genes list of scaffold scaffold91.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_91.1_03592.t1 1 1 Death 210 286 6.1e-15 54.7 6.8e-19 1.0e-14 54.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_91.1_03592.t1 gi|524871625|ref|XP_005092584.1| PREDICTED: netrin receptor UNC5B-like [Aplysia californica] 0.0
pfu_aug2.0_91.1_03592.t1 gi|676492340|ref|XP_009065885.1| hypothetical protein LOTGIDRAFT_197315 [Lottia gigantea] 0.0
pfu_aug2.0_91.1_03592.t1 gi|269784893|ref|NP_001161598.1| netrin receptor unc5-like protein precursor [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_91.1_03592.t1 gi|242024248|ref|XP_002432540.1| Netrin receptor UNC5C precursor, putative [Pediculus humanus corporis] 0.0
pfu_aug2.0_91.1_03592.t1 gi|260830830|ref|XP_002610363.1| hypothetical protein BRAFLDRAFT_209377 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug2.0_91.1_03592.t1
Definition-
>pfu_aug2.0_91.1_03592.t1
atgacagaaacactaagctggtacactgtcattggagaagcagtgcccaatgggcgacccgtcaagatccttcgcttagc
agcatttgcccccatgaccccaccctccatggacttcagcataagggtctatgttgttgaagacacacaagatgcccttg
agggagtggtgcaggaagagaggaagtttggaggtcgtttattagacaagccaaaacaaataccattccaggacggaggt
cataacctctgtttgaccattgaaggattgtcaccgggctggagaagtaaactggccgctaactaccaggagataccctt
ccaacatatttggagcggtaaccagaacagtctacattgttccttctctctggagctggtagatcgagcagtacaggacg
ttagctgtaaaatacaggtctatcagaaagccatactcagtaatagacaggtgctccacatacaaagtcactacaaagat
aaggtaccagctgtatgttccacgccctcctcaacattaaaaggacggtcttccactgtaacaacaaattccagctcagg
ttttagttccatggtcgcattggatccacacggaacaaatttcagattaccaccacatattaggagtcagttatgtatgc
tgttagatccgcccaatgtaagaggcaatgattggcgtatgcttgctcaagctctcactgttgataggtatatacagtat
tttgctacaaagagttcacctacagagcacattctgaacttatgggaggcacggcacagagaggaatcagctattacaga
tttaatgaacattttccgagtgatgggtagaatggacgctgcggcagtgatagaaaaagacattggttcatggttatga

Protein
Protein IDpfu_aug2.0_91.1_03592.t1
Definition-
>pfu_aug2.0_91.1_03592.t1
MTETLSWYTVIGEAVPNGRPVKILRLAAFAPMTPPSMDFSIRVYVVEDTQDALEGVVQEERKFGGRLLDKPKQIPFQDGG
HNLCLTIEGLSPGWRSKLAANYQEIPFQHIWSGNQNSLHCSFSLELVDRAVQDVSCKIQVYQKAILSNRQVLHIQSHYKD
KVPAVCSTPSSTLKGRSSTVTTNSSSGFSSMVALDPHGTNFRLPPHIRSQLCMLLDPPNVRGNDWRMLAQALTVDRYIQY
FATKSSPTEHILNLWEARHREESAITDLMNIFRVMGRMDAAAVIEKDIGSWL

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