Gene
| Gene Model ID | pfu_aug2.0_91.1_03594 |
|---|---|
| Locus | scaffold91.1 : 346834 ... 385329 : + |
| To GenomeBrowser | scaffold91.1:346834..385329 |
| Genes list of scaffold | scaffold91.1 |
| Synonym | pfu_aug1.0_1531.1_08004 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| short-chain dehydrogenase reductase family 42e member 1-like isoform x2 | GO:0004032 GO:0016020 GO:0033764 GO:0044710 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_91.1_03594.t1 | 1 | 1 | RmlD_sub_bind | 6 | 189 | 3.3e-15 | 55.7 | 2.6e-18 | 4.9e-15 | 55.1 |
| pfu_aug2.0_91.1_03594.t1 | 1 | 1 | 3Beta_HSD | 7 | 265 | 0.0 | 226.1 | 0.0 | 0.0 | 225.7 |
| pfu_aug2.0_91.1_03594.t1 | 1 | 1 | Epimerase | 7 | 230 | 3.1e-33 | 115.1 | 2.3e-36 | 4.3e-33 | 114.7 |
| pfu_aug2.0_91.1_03594.t1 | 1 | 1 | NAD_binding_10 | 7 | 181 | 2.4e-11 | 43.9 | 2.1e-14 | 3.9e-11 | 43.2 |
| pfu_aug2.0_91.1_03594.t1 | 1 | 1 | Polysacc_synt_2 | 7 | 117 | 5.9e-08 | 31.9 | 9.5e-11 | 1.8e-07 | 30.3 |
| pfu_aug2.0_91.1_03594.t1 | 2 | 1 | NAD_binding_4 | 8 | 39 | 1.4e-13 | 50.3 | 0.13 | 240.0 | 0.4 |
| pfu_aug2.0_91.1_03594.t1 | 2 | 2 | NAD_binding_4 | 58 | 210 | 1.4e-13 | 50.3 | 5.0e-16 | 9.3e-13 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_91.1_03594.t1 | gi|591368990|ref|XP_007059330.1| | PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Chelonia mydas] | 0.0 |
| pfu_aug2.0_91.1_03594.t1 | gi|676492337|ref|XP_009065884.1| | hypothetical protein LOTGIDRAFT_197313 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_91.1_03594.t1 | gi|700322900|ref|XP_009928006.1| | PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 isoform X1 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_91.1_03594.t1 | gi|187661949|sp|A8DZE7.1|D42E1_DANRE | 0.0 | |
| pfu_aug2.0_91.1_03594.t1 | gi|498930705|ref|XP_004539763.1| | PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_91.1_03594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03594.t1 atgactcgtgagacccatttagtaacaggaggtggtgggtatccagggtatcaccttggtaagaaactcgctgaattagg aaaatctgttattctcctggacataagacctccatcatggcagatggtagaaggaatgaagttcatccagtgtaacatca ctcggtatgatgaagtagaggaggcttttagaggagtggactgtgtatatcatttagcatcttatggcatgtcagggaga gaacagttgaacaagaaattaatcgaggcagtgaacattggagggaccaagaatgtcattgatgcatgtataaagcacag aatttcccggcttgtttacaccagtacgtataacgtcgtgtttgggggacaggaaatcatggacggagaagagtcccttc catatctacctcttgacaagcatccagaccactattctcgtaccaagagcatagcggaacagctagtaatggaagctaac ggcagggaggggcttcatacgtgtgccttacgtctggctggtgtctatggtccgggggaacaaagacatatacctagaac catgagcatggtagaggcaggtttcctgttgatgctatatggtgaaggttccctacaggactttctacatgtggacaatc tggtacagggccatatcctggctatgcaggctttatcaccagccaatcatagtgtagcagctggccagacatactttcta tcagatggtgctcccattaatactttccttttcttcaaaccactttttgaaggattgggatacaaattaccaaaactaca aatatctctaagtgttgtgtattttatagcatatttaacagagtggatccactacatagtagggcggatctataacttcc agccaatgttgaccaggactgaggtatacaagaccggtgtcacacactacttcagtatacgtaaagctcagcgagatttg ggttacgaacccacggtacagaatgatttgactttagtgcttaaggaatatatagcagcaggacatggcaggaagagaaa gaagggctcctcttttgtgtattatcttgtaaatgttataataggacttatatttgcatcatttatactttcatatttac ctggagtaaaataa |
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Protein
| Protein ID | pfu_aug2.0_91.1_03594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03594.t1 MTRETHLVTGGGGYPGYHLGKKLAELGKSVILLDIRPPSWQMVEGMKFIQCNITRYDEVEEAFRGVDCVYHLASYGMSGR EQLNKKLIEAVNIGGTKNVIDACIKHRISRLVYTSTYNVVFGGQEIMDGEESLPYLPLDKHPDHYSRTKSIAEQLVMEAN GREGLHTCALRLAGVYGPGEQRHIPRTMSMVEAGFLLMLYGEGSLQDFLHVDNLVQGHILAMQALSPANHSVAAGQTYFL SDGAPINTFLFFKPLFEGLGYKLPKLQISLSVVYFIAYLTEWIHYIVGRIYNFQPMLTRTEVYKTGVTHYFSIRKAQRDL GYEPTVQNDLTLVLKEYIAAGHGRKRKKGSSFVYYLVNVIIGLIFASFILSYLPGVK |
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