Gene
| Gene Model ID | pfu_aug2.0_91.1_03598 |
|---|---|
| Locus | scaffold91.1 : 484994 ... 489638 : + |
| To GenomeBrowser | scaffold91.1:484994..489638 |
| Genes list of scaffold | scaffold91.1 |
| Synonym | pfu_aug1.0_140210.1_42721 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_91.1_03598.t1 | 1 | 1 | DUF2962 | 7 | 161 | 8.7e-36 | 122.8 | 4.1e-39 | 1.0e-35 | 122.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_91.1_03598.t1 | gi|612030732|ref|XP_007496220.1| | PREDICTED: translation machinery-associated protein 16 [Monodelphis domestica] | 1.4013e-45 |
| pfu_aug2.0_91.1_03598.t1 | gi|557013160|ref|XP_006007124.1| | PREDICTED: translation machinery-associated protein 16 [Latimeria chalumnae] | 4.2039e-45 |
| pfu_aug2.0_91.1_03598.t1 | gi|363733140|ref|XP_001233405.2| | PREDICTED: translation machinery-associated protein 16 isoform X1 [Gallus gallus] | 8.40779e-45 |
| pfu_aug2.0_91.1_03598.t1 | gi|78042528|ref|NP_001030206.1| | translation machinery-associated protein 16 [Bos taurus] | 2.00386e-43 |
| pfu_aug2.0_91.1_03598.t1 | gi|742195977|ref|XP_010856644.1| | PREDICTED: translation machinery-associated protein 16 [Bison bison bison] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug2.0_91.1_03598.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03598.t1 atgccgaaagcaccgaaagctaaagtgggagaaaataaaaaagccatccatcctaacagtcggaaagctgtgtacttggc gagaaaatctcatcatgaacacagagtatcacagaccaagacacagacctctatcaaaatggaactacaagccgaaaaac tgatgtggtttcagagtcacatggattctgaaaaagttaaatttacgaaagacgacttagcagaactcattaaattgtat ttaaagcgatttgaggaggaactggaacagatagaaattgttagaagtataggaaatcgtaaaggacagcagcatgttca gcgccagaacgcaatatcaatgacacttgaacgcgagaaacgccagcttcacgagggagtgttcgaagtgccagacatta taaatgtgaagagtttagaaaatttccgaaaatggactggagagatcaaagttattgacaccataatattaaagaagttt tctcaagaagatttggacaatatcaaaaaagacgacgtaatggacgaggaagaaagtgcagtctga |
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Protein
| Protein ID | pfu_aug2.0_91.1_03598.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03598.t1 MPKAPKAKVGENKKAIHPNSRKAVYLARKSHHEHRVSQTKTQTSIKMELQAEKLMWFQSHMDSEKVKFTKDDLAELIKLY LKRFEEELEQIEIVRSIGNRKGQQHVQRQNAISMTLEREKRQLHEGVFEVPDIINVKSLENFRKWTGEIKVIDTIILKKF SQEDLDNIKKDDVMDEEESAV |
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