Gene
| Gene Model ID | pfu_aug2.0_91.1_03599 |
|---|---|
| Locus | scaffold91.1 : 489868 ... 501583 : - |
| To GenomeBrowser | scaffold91.1:489868..501583 |
| Genes list of scaffold | scaffold91.1 |
| Synonym | pfu_aug1.0_10715.1_53574 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proliferating cell nuclear antigen | GO:0000701 GO:0005737 GO:0005813 GO:0006275 GO:0006298 GO:0009617 GO:0014823 GO:0019985 GO:0030337 GO:0030855 GO:0030971 GO:0032077 GO:0032139 GO:0032405 GO:0042802 GO:0043596 GO:0070062 GO:0070182 GO:0070557 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_91.1_03599.t1 | 1 | 1 | PCNA_N | 1 | 125 | 0.0 | 193.6 | 0.0 | 0.0 | 192.9 |
| pfu_aug2.0_91.1_03599.t1 | 1 | 1 | Rad9 | 14 | 220 | 2.3e-06 | 26.9 | 5.7e-10 | 2.8e-06 | 26.6 |
| pfu_aug2.0_91.1_03599.t1 | 2 | 1 | PCNA_C | 68 | 101 | 0.0 | 172.1 | 0.11 | 570.0 | 0.4 |
| pfu_aug2.0_91.1_03599.t1 | 2 | 2 | PCNA_C | 127 | 244 | 0.0 | 172.1 | 0.0 | 0.0 | 169.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_91.1_03599.t1 | gi|675874566|ref|XP_009022843.1| | hypothetical protein HELRODRAFT_185039 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_91.1_03599.t1 | gi|524872446|ref|XP_005092985.1| | PREDICTED: proliferating cell nuclear antigen-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_91.1_03599.t1 | gi|676428770|ref|XP_009045383.1| | hypothetical protein LOTGIDRAFT_185272 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_91.1_03599.t1 | gi|241747703|ref|XP_002414350.1| | DNA polymerase delta processivity factor, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_91.1_03599.t1 | gi|260787680|ref|XP_002588880.1| | hypothetical protein BRAFLDRAFT_115812 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_91.1_03599.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03599.t1 atgttcgaagctcgacttgttcagggatcactatggaagaaagtgttggaagccatcaaagacttgataaatgaagcaat atgggattgcagtggtactggaatcacactgcaagctatggacaatgcacacgttgctttggtagcggtgaatttgcgaa gtgatggatttgaaacctacaggtgcgacagaaacttgtcgatggggatgagtctaacgagcatgtcaaagattttgaag tgtgccagcaacgatgatgtcattaccataaaagcgaacgacaatgcagatactgtaacatttatgtttgaatcacccaa taatgagaaagtgtcagattattcgatgaaattgtttgacttggacactgagcagttgggaattccagacacagaatata gtgcagtagttaagatgccatctgctgaatttcaaagaatatgccgagatttaagtcagattggagaatctgttgtcatt tgctgcacgaaagaaggcgttaaattttctgccagtggtgacctcggaacaggttggagaagcaattattgccatgtgtg gaatgtcaaattggctcagaactccagtgctgacaaggaagaagaggcagttatagtagagatgaaccaggctgtgacct tgacctttgccctccgataccttaacttcttcacaaaggctactcccctcgctccacaggtcactctgtccatgtcacag gatgtaccattagattag |
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Protein
| Protein ID | pfu_aug2.0_91.1_03599.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03599.t1 MFEARLVQGSLWKKVLEAIKDLINEAIWDCSGTGITLQAMDNAHVALVAVNLRSDGFETYRCDRNLSMGMSLTSMSKILK CASNDDVITIKANDNADTVTFMFESPNNEKVSDYSMKLFDLDTEQLGIPDTEYSAVVKMPSAEFQRICRDLSQIGESVVI CCTKEGVKFSASGDLGTGWRSNYCHVWNVKLAQNSSADKEEEAVIVEMNQAVTLTFALRYLNFFTKATPLAPQVTLSMSQ DVPLD |
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