Gene
| Gene Model ID | pfu_aug2.0_91.1_03600 |
|---|---|
| Locus | scaffold91.1 : 502834 ... 527990 : + |
| To GenomeBrowser | scaffold91.1:502834..527990 |
| Genes list of scaffold | scaffold91.1 |
| Synonym | pfu_aug1.0_10715.1_53573 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium uptake protein mitochondrial isoform x3 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_91.1_03600.t2 | 4 | 1 | EF-hand_8 | 180 | 195 | 1.0e-12 | 47.4 | 0.42 | 1000.0 | -0.7 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 1 | EF-hand_6 | 203 | 213 | 1.8e-11 | 42.8 | 1.3 | 3200.0 | -1.5 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 1 | EF-hand_1 | 205 | 213 | 1.3e-11 | 42.9 | 3.7 | 9200.0 | -3.6 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 2 | EF-hand_6 | 231 | 251 | 1.8e-11 | 42.8 | 1.3 | 3300.0 | -1.5 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 2 | EF-hand_1 | 238 | 250 | 1.3e-11 | 42.9 | 0.41 | 1000.0 | -0.6 |
| pfu_aug2.0_91.1_03600.t2 | 4 | 2 | EF-hand_8 | 253 | 282 | 1.0e-12 | 47.4 | 1.0e-05 | 0.026 | 14.1 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 3 | EF-hand_6 | 260 | 283 | 1.8e-11 | 42.8 | 5.4e-08 | 0.00013 | 21.5 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 3 | EF-hand_1 | 261 | 282 | 1.3e-11 | 42.9 | 1.9e-08 | 4.8e-05 | 22.3 |
| pfu_aug2.0_91.1_03600.t2 | 3 | 1 | EF-hand_7 | 262 | 282 | 1.0e-10 | 41.5 | 1.4e-06 | 0.0035 | 17.4 |
| pfu_aug2.0_91.1_03600.t2 | 2 | 1 | EF-hand_5 | 263 | 282 | 5.4e-12 | 44.4 | 8.5e-09 | 2.1e-05 | 23.6 |
| pfu_aug2.0_91.1_03600.t2 | 3 | 2 | EF-hand_7 | 263 | 282 | 1.0e-10 | 41.5 | 1.1e-06 | 0.0028 | 17.7 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 4 | EF-hand_1 | 321 | 335 | 1.3e-11 | 42.9 | 0.04 | 99.0 | 2.6 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 4 | EF-hand_6 | 321 | 335 | 1.8e-11 | 42.8 | 0.3 | 750.0 | 0.5 |
| pfu_aug2.0_91.1_03600.t2 | 3 | 3 | EF-hand_7 | 321 | 394 | 1.0e-10 | 41.5 | 7.0e-08 | 0.00017 | 21.6 |
| pfu_aug2.0_91.1_03600.t2 | 4 | 3 | EF-hand_8 | 325 | 332 | 1.0e-12 | 47.4 | 5.0 | 12000.0 | -4.1 |
| pfu_aug2.0_91.1_03600.t2 | 4 | 4 | EF-hand_8 | 352 | 397 | 1.0e-12 | 47.4 | 5.4e-11 | 1.3e-07 | 31.0 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 5 | EF-hand_1 | 372 | 396 | 1.3e-11 | 42.9 | 1.3e-08 | 3.2e-05 | 22.9 |
| pfu_aug2.0_91.1_03600.t2 | 2 | 2 | EF-hand_5 | 374 | 394 | 5.4e-12 | 44.4 | 3.5e-07 | 0.00087 | 18.5 |
| pfu_aug2.0_91.1_03600.t2 | 5 | 5 | EF-hand_6 | 374 | 397 | 1.8e-11 | 42.8 | 1.7e-08 | 4.3e-05 | 23.0 |
Transcript
| Transcript ID | pfu_aug2.0_91.1_03600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03600.t1 atgttgcgacttcaaccagctaagaggacacaatggacagatgctgttctaagatgttttcatggaaatggtataagggg tacaagacagagtgtagtagctgttgcaccacatacttacaattcgaagacacagcagcagcaatgtcggagctttagtt tgtcaagtatacaatatgtgaaagagggttataccaagttccaacacaaggaagctgtaaaagataacaggttaaagcag atctggacatcagttggaggtatcacaatcttaggattctgtacttacgtcttctttctaaaggataagacagaggcagc ttctcctgaagtagaatttgaagaagaatctaatgaagggaaagtttctgaaacagatgaggataaggatgatgaaaaaa caaaaaagaagaagatcggatttcgtgagagacgtataattgagtatgagaatcgtatcagggcgtattctacaccagat aagatttttcggtattttgccacgttaaaagttcatcaggataatgaatgggaagtttacatgacacctgaagatttcgt cagatccatcacacctgggatgaagcagcctgagggacttggattggacaagtttatgaagtttgatccacagcaagata aagtggaatggaatctcggcccagacagtgtattctaccagctaggagagagtggactcatatccttctctgattacatc ttcctactcaccgttctctctactcccccaaggaactttcaaattgcatttcgtatgtttgatgtaaacggggatggaga ggtagagatggaagagtttatcaaggtaaatgacattataaggaatcagactagcatgggaatgagacacaaagaccatg cagtgacaggcagcgtcaataagggggtcggatcggccctcatgacctacttctttggccaagatggcaagaggaagctc actgttaaagagttcttacattttcaacagcaagttcagagagaggttctccaaatagagtttgatcatgaagagacctt gaagcatgtagctagtacagtggcaggatgtaaattatcaaaccatgtggtagaagtcgtcttcacattatttgatgaaa acggggatggacagctgagtaacaaggaatttatatctgtgatgaagcagcgagtgatgaggggactagatcagccaaaa gataccggctttattaaactcatgaactcaatgtggaaatgtgcaaagagtgaaactcacgcagcgtttctggaataa |
|
| Transcript ID | pfu_aug2.0_91.1_03600.t2 |
| Definition | - |
>pfu_aug2.0_91.1_03600.t2 atgttgcgacttcaaccagctaagaggacacaatggacagatgctgttctaagatgttttcatggaaatggtataagggg tacaagacagagtgtagtagctgttgcaccacatacttacaattcgaagacacagcagcagcaatgtcggagctttagtt tgtcaagtatacaatatgtgaaagagggttataccaagttccaacacaaggaagctgtaaaagataacaggttaaagcag atctggacatcagttggaggtatcacaatcttaggattctgtacttacgtcttctttctaaaggataagacagaggcagc ttctcctgaagtagaatttgaagaagaatctaatgaagggaaagtttctgaaacagatgaggataaggatgatgaaaaaa caaaaaagaagaagatcggatttcgtgagagacgtataattgagtatgagaatcgtatcagggcgtattctacaccagat aagatttttcggtattttgccacgttaaaagttcatcaggataatgaatgggaagtttacatgacacctgaagatttcgt cagatccatcacacctgggatgaagcagcctgagggacttggattggacaagtttatgaagtttgatccacagaaggatg atctcagaaagatgcaagataaagtggaatggaatctcggcccagacagtgtattctaccagctaggagagagtggactc atatccttctctgattacatcttcctactcaccgttctctctactcccccaaggaactttcaaattgcatttcgtatgtt tgatgtaaacggggatggagaggtagagatggaagagtttatcaaggtaaatgacattataaggaatcagactagcatgg gaatgagacacaaagaccatgcagtgacaggcagcgtcaataagggggtcggatcggccctcatgacctacttctttggc caagatggcaagaggaagctcactgttaaagagttcttacattttcaacagcaagttcagagagaggttctccaaataga gtttgatcatgaagagaccttgaagcatgtagctagtacagtggcaggatgtaaattatcaaaccatgtggtagaagtcg tcttcacattatttgatgaaaacggggatggacagctgagtaacaaggaatttatatctgtgatgaagcagcgagtgatg aggggactagatcagccaaaagataccggctttattaaactcatgaactcaatgtggaaatgtgcaaagagtgaaactca cgcagcgtttctggaataa |
|
Protein
| Protein ID | pfu_aug2.0_91.1_03600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_91.1_03600.t1 MLRLQPAKRTQWTDAVLRCFHGNGIRGTRQSVVAVAPHTYNSKTQQQQCRSFSLSSIQYVKEGYTKFQHKEAVKDNRLKQ IWTSVGGITILGFCTYVFFLKDKTEAASPEVEFEEESNEGKVSETDEDKDDEKTKKKKIGFRERRIIEYENRIRAYSTPD KIFRYFATLKVHQDNEWEVYMTPEDFVRSITPGMKQPEGLGLDKFMKFDPQQDKVEWNLGPDSVFYQLGESGLISFSDYI FLLTVLSTPPRNFQIAFRMFDVNGDGEVEMEEFIKVNDIIRNQTSMGMRHKDHAVTGSVNKGVGSALMTYFFGQDGKRKL TVKEFLHFQQQVQREVLQIEFDHEETLKHVASTVAGCKLSNHVVEVVFTLFDENGDGQLSNKEFISVMKQRVMRGLDQPK DTGFIKLMNSMWKCAKSETHAAFLE |
|
| Protein ID | pfu_aug2.0_91.1_03600.t2 |
| Definition | - |
>pfu_aug2.0_91.1_03600.t2 MLRLQPAKRTQWTDAVLRCFHGNGIRGTRQSVVAVAPHTYNSKTQQQQCRSFSLSSIQYVKEGYTKFQHKEAVKDNRLKQ IWTSVGGITILGFCTYVFFLKDKTEAASPEVEFEEESNEGKVSETDEDKDDEKTKKKKIGFRERRIIEYENRIRAYSTPD KIFRYFATLKVHQDNEWEVYMTPEDFVRSITPGMKQPEGLGLDKFMKFDPQKDDLRKMQDKVEWNLGPDSVFYQLGESGL ISFSDYIFLLTVLSTPPRNFQIAFRMFDVNGDGEVEMEEFIKVNDIIRNQTSMGMRHKDHAVTGSVNKGVGSALMTYFFG QDGKRKLTVKEFLHFQQQVQREVLQIEFDHEETLKHVASTVAGCKLSNHVVEVVFTLFDENGDGQLSNKEFISVMKQRVM RGLDQPKDTGFIKLMNSMWKCAKSETHAAFLE |
|