Gene
| Gene Model ID | pfu_aug2.0_911.1_04683 |
|---|---|
| Locus | scaffold911.1 : 51267 ... 57315 : - |
| To GenomeBrowser | scaffold911.1:51267..57315 |
| Genes list of scaffold | scaffold911.1 |
| Synonym | pfu_aug1.0_9011.1_09870 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_911.1_04683.t1 | 1 | 1 | TROVE | 31 | 396 | 0.0 | 222.6 | 0.0 | 0.0 | 218.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_911.1_04683.t1 | gi|507551552|ref|XP_004659575.1| | PREDICTED: 60 kDa SS-A/Ro ribonucleoprotein isoform X1 [Jaculus jaculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_911.1_04683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04683.t1 atggatgaaatggaagttgatgacgaccttgattattccattcaagaatgctgtttacccatccaaagagaatctttacc gtatcaaaaacagaacagcaacggcggatactcgtacgaatgcgacaacattaccaaactgcacagatttctgtgtttgg gatcagaggaagggacgtattatacaggggaacaagactgtaaaaaggaaaatgcaaagtgtatagatagtctcatctct aaaggcgaaggagagagggtggttgatgccatagaaacaataagtgttacaggaagagcatctaaacagttcccaatcct atttgctttggccctctgttgccgcagtaatgatcaaaaggttaaagataaagcatacatggtgatgccaaaagtctgcc ggattcccacgcaccttttccagtttattaagtattgccaaaatgtgagtgatactgggtctggatgggggcgtgcacat cgccgagcaataagcaactggtatataaagtatatgggagaaaacacagagaatgaggcagaaggtctgctccggctagc gcaccatattacaaagtataaaagcagacatggctggagtcacaaagatgttctacgactggcccacgtaaaatcgagca ataccacaatgcaatttcttcttcgatacatcgcaaaaggtcttaaagatgcggaagaattttataaagatgccatcaca gcagtcgactatcacaggacttccctgtcaaaagtggtggagtttttagaggtggtagagagactaagccaaattagaaa tccagatgaaatgacacggcttatcatagagcataagcttgcgagagagcatgttccaaccaagatgctgcaagatgtaa cagtttggagagctctcattcggtacatgcccattagagctatgttacgcaatctaggaaggatgactagcatgaatgta ctccaaccatcttcctttgagcatagtttgactcttgacaaaataagggataaggtctctatgaaaaatgcaagaattca tccctttgatcttttaattgctctgaggcaatatgaaaaagggcgcggagagcttggaaaattagtatggactccagatg atgcgataaagagagcactagagaatgctctttatgattcctttgtgtttgcagagccaaccaacaagaagcatttactg gcaatagatgtcagtgagtctatggatacacctgttgtaggcacaccatcaattaccgcgcgtgatggggctgcagtgat ggcgatgtatacacttcgtaatgagactaatgcaaactgcaaaatagttgctttttcttgtgcccagtctcaggaacatc ctgcaactcttaggcagttacaagttaaccacacagacaatctgaatacagtgattgagacatgtaagggaattccatca ggcgatactgactgtgcattaccaatccttcatgccttagagaagaaagagaaatatgatgttttcatcgtctatacaga ctcagaaacatactttggtaatacccatccagcagatgctctgaagcagtatagctacagcttgaaaactcagacaaaat ttatcgtgtgtgggatgacaagtaacggatttactctggccaatccagaggatccattcatgatggatgtggtgggattt gattccaacgcaccaatggccatcatgaatttcataaacggaaacatttaa |
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Protein
| Protein ID | pfu_aug2.0_911.1_04683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04683.t1 MDEMEVDDDLDYSIQECCLPIQRESLPYQKQNSNGGYSYECDNITKLHRFLCLGSEEGTYYTGEQDCKKENAKCIDSLIS KGEGERVVDAIETISVTGRASKQFPILFALALCCRSNDQKVKDKAYMVMPKVCRIPTHLFQFIKYCQNVSDTGSGWGRAH RRAISNWYIKYMGENTENEAEGLLRLAHHITKYKSRHGWSHKDVLRLAHVKSSNTTMQFLLRYIAKGLKDAEEFYKDAIT AVDYHRTSLSKVVEFLEVVERLSQIRNPDEMTRLIIEHKLAREHVPTKMLQDVTVWRALIRYMPIRAMLRNLGRMTSMNV LQPSSFEHSLTLDKIRDKVSMKNARIHPFDLLIALRQYEKGRGELGKLVWTPDDAIKRALENALYDSFVFAEPTNKKHLL AIDVSESMDTPVVGTPSITARDGAAVMAMYTLRNETNANCKIVAFSCAQSQEHPATLRQLQVNHTDNLNTVIETCKGIPS GDTDCALPILHALEKKEKYDVFIVYTDSETYFGNTHPADALKQYSYSLKTQTKFIVCGMTSNGFTLANPEDPFMMDVVGF DSNAPMAIMNFINGNI |
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