Gene
| Gene Model ID | pfu_aug2.0_911.1_04685 |
|---|---|
| Locus | scaffold911.1 : 63596 ... 69339 : + |
| To GenomeBrowser | scaffold911.1:63596..69339 |
| Genes list of scaffold | scaffold911.1 |
| Synonym | pfu_aug1.0_9011.1_09868 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-6-like | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_911.1_04685.t1 | 1 | 1 | Neur_chan_LBD | 24 | 192 | 1.1e-32 | 112.9 | 3.3e-36 | 1.6e-32 | 112.3 |
| pfu_aug2.0_911.1_04685.t1 | 1 | 1 | Neur_chan_memb | 200 | 329 | 1.3e-10 | 41.6 | 2.6e-14 | 1.3e-10 | 41.6 |
Transcript
| Transcript ID | pfu_aug2.0_911.1_04685.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04685.t1 atggtacgcaaacaaaagaagatccaccttaaaggcagtacagacatcgagcttcttccagtggataacaaattcgacga agtgaatgaagttttctctgtcagtgggatcttatacttgtactggacagacgaacggatggtctgggaccctcaagact acaacggtacaactatggtgtctttcacggaaagagaagtttggacgccaaatatcgtgcttgcgaattccaatgatgac aacgaagctctacatttgggaaatgattggatgtacgttagatacatgcacaatggaacagctatttggtcgcctatggc acaattcaactcttactgtaaaccgaacgtaattaagtttccatatgataaacaggaatgtggattaaatttcgtagcat ggacacacggacctcatgaaatcgctttccagtaccagtcaactaaagttaacatggacttttaccatgaaaatggtatt tggattattaatgatggcagaatagcatcttggtttgccgtaatagaaggtgaaaggagagaactcctattgataatatt ctacctacaaagaagggctaatttcttcttacttaacttaattctgccattaacagtgatgaatatcttgaatgttctgg tatttattctaccccctacgtctggtgaccgtgttagttattccattacagttcttcttgcgatttgtgtttatatgaca atagtgacggacaaaatacctaaaacatccagcccaggcgtctccttcatgtgcaccaaatgtcttgttgacatgatcat cagcagctttgttgttttgtttacaattatgggtctacgactgtaccacacagcggaagatgttgtcatatccaaacata cagctcttgttacaaaatgtattcttggtctttattgtaaggagaaaaccaggattgagaactcggacaaagttgtggag ttccaaagttctactgacgaaaaatcttttccaatgcacaccagtggcgaaggaaataatacaacaacatggaaacatgt tggaaaagcgagcgatattgttttttgtattgtgtgtacttttgctttcgctatgtcagatatcttgttttttgcttatg tgcaatag |
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Protein
| Protein ID | pfu_aug2.0_911.1_04685.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04685.t1 MVRKQKKIHLKGSTDIELLPVDNKFDEVNEVFSVSGILYLYWTDERMVWDPQDYNGTTMVSFTEREVWTPNIVLANSNDD NEALHLGNDWMYVRYMHNGTAIWSPMAQFNSYCKPNVIKFPYDKQECGLNFVAWTHGPHEIAFQYQSTKVNMDFYHENGI WIINDGRIASWFAVIEGERRELLLIIFYLQRRANFFLLNLILPLTVMNILNVLVFILPPTSGDRVSYSITVLLAICVYMT IVTDKIPKTSSPGVSFMCTKCLVDMIISSFVVLFTIMGLRLYHTAEDVVISKHTALVTKCILGLYCKEKTRIENSDKVVE FQSSTDEKSFPMHTSGEGNNTTTWKHVGKASDIVFCIVCTFAFAMSDILFFAYVQ |
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