Gene
| Gene Model ID | pfu_aug2.0_914.1_14651 |
|---|---|
| Locus | scaffold914.1 : 12056 ... 49418 : + |
| To GenomeBrowser | scaffold914.1:12056..49418 |
| Genes list of scaffold | scaffold914.1 |
| Synonym | pfu_aug1.0_26629.1_33572 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_914.1_14651.t1 | 4 | 1 | Sushi | 220 | 255 | 5.3e-06 | 26.6 | 1.4e-09 | 5.3e-06 | 26.6 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 1 | GCC2_GCC3 | 227 | 242 | 7.6e-14 | 51.0 | 0.27 | 990.0 | -0.6 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 2 | GCC2_GCC3 | 268 | 290 | 7.6e-14 | 51.0 | 3.8e-06 | 0.014 | 14.9 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 3 | GCC2_GCC3 | 276 | 324 | 7.6e-14 | 51.0 | 1.9e-11 | 7.1e-08 | 31.9 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 4 | GCC2_GCC3 | 293 | 337 | 7.6e-14 | 51.0 | 1.8e-09 | 6.8e-06 | 25.5 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 5 | GCC2_GCC3 | 316 | 355 | 7.6e-14 | 51.0 | 5.9e-07 | 0.0022 | 17.5 |
| pfu_aug2.0_914.1_14651.t1 | 4 | 2 | Sushi | 324 | 338 | 5.3e-06 | 26.6 | 2.7 | 10000.0 | -3.1 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 6 | GCC2_GCC3 | 327 | 359 | 7.6e-14 | 51.0 | 3.1e-07 | 0.0012 | 18.4 |
| pfu_aug2.0_914.1_14651.t1 | 4 | 3 | Sushi | 365 | 379 | 5.3e-06 | 26.6 | 1.7 | 6200.0 | -2.4 |
| pfu_aug2.0_914.1_14651.t1 | 1 | 1 | Fibrinogen_C | 451 | 601 | 1.4e-22 | 80.4 | 7.3e-26 | 2.7e-22 | 79.5 |
| pfu_aug2.0_914.1_14651.t1 | 4 | 4 | Sushi | 456 | 468 | 5.3e-06 | 26.6 | 3.0 | 11000.0 | -3.2 |
| pfu_aug2.0_914.1_14651.t1 | 7 | 7 | GCC2_GCC3 | 596 | 606 | 7.6e-14 | 51.0 | 0.38 | 1400.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_914.1_14651.t1 | gi|170068780|ref|XP_001868994.1| | microfibril-associated glycoprotein 4 [Culex quinquefasciatus] | 4.0e-16 |
| pfu_aug2.0_914.1_14651.t1 | gi|198429483|ref|XP_002125040.1| | PREDICTED: fibrinogen C domain-containing protein 1-like [Ciona intestinalis] | 1.0e-15 |
| pfu_aug2.0_914.1_14651.t1 | gi|260784600|ref|XP_002587353.1| | hypothetical protein BRAFLDRAFT_96224 [Branchiostoma floridae] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_914.1_14651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_914.1_14651.t1 atgggtaatgagaggctgattataacagatgatggtaggtatgacaagaaaccgactgccgagatgataaacagaacagt ggtagtcctacccatggatcctctattgaaacagattctacgtattctcagatttctagattttctagctttttcacgta cttctatttcattcttttctgatgaagtgatattttcaactatagaggcgaaccacgccatgatcgactgctacgccctg agaaacaaaggaggggatctccaacaacaccaggttgtagcacccacagcaaaaccccaaaacacccaatgcaaaaacac aaagcagacaagcacaaagagacgcgtaagggacaagcaacgtcaacgcacaacacagaaacatcaaacacaaaggacta cacataaaccaacgaaccaatgggcaaccggtgccgactttggacggctatcttccacggaaatagcagaaagtatggtt atcctggattacatagaggatcatccatgccgaatcgagaatggactgtcagacgaggatttacagctctctgtcactat atgtacagatgatctgatctatattgagataacagactgtagattccctccgctcgtaagcaatgctgccggtttacaaa gcaatggaatagggatcttctcaagggttgtcttcacttgcaaagaaggatttttcccgaatcgttatgatgcagaaata acatgcatggaaaatggcacatggacaaacactcaattcagatgcattaaaatttgtggcccagggcaagaagatagagg agatggttgtcaggattgcaaagctggtacatattcagacacagtaggaacggaaccatgtcaagattgccttgctggaa catatcaaaacaaagcaggacaaacctcctgtgaattatgtcccctgggtacctggatgagatacgagggacaaacatct tgttggaattgctacgaagggacttatatgaatgatactggagctaccaattgctacaagtgcccggatgaccattacca ggatgcgtctcggcaaacacattgtttactatgctctatacatgacaatccctgtggacagccttataaaatcaaacaca caaacctgacagttgctccaagcactgatgggaaatattgtcttgcaacatatcaatgtctcggtttgaaacaaggaagt ttattggaagacgaagtatctgttgcgtgtagaagatatgagaacgaatttaactggatagaaccaaacttcgattgcca cgattcccctcttacacaaaaagtaccaggtaaaccttatccctgtcagacgtggctaagaatgcataccattcataaat acacgtactactgtgaaaatatatacgacgaaggcagttggacgataatacaacaaagattttcagagagaaattcatca tcgtttgacaagacatacgctgaatatgaagaaggattcggtcctacgatggatgaagactattggataggtaacaaagc actatcagagctcacaaaagtgtccattgaactggtaatttttgtttggaatgatgaaaataggcaactgacagctcgat atgcaacgttcagggtcaaaccggaaaacttcacattgcacattgcaggttatgaggccgacaaaagtgacctagttgac tgtttgcaatacgctaatggaagcatattctttacgaaagatgaagactcgagttggaattgttctacaaaacaggaaag tggttggtggtttaatgtagaacgatctggctacacgcactgccagtactgtgggaatgttaacaatttgtttggaagtc gaacctacaaaaagagtcgcataatgataaagaaaatgggtcatagtttcttcgtttga |
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Protein
| Protein ID | pfu_aug2.0_914.1_14651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_914.1_14651.t1 MGNERLIITDDGRYDKKPTAEMINRTVVVLPMDPLLKQILRILRFLDFLAFSRTSISFFSDEVIFSTIEANHAMIDCYAL RNKGGDLQQHQVVAPTAKPQNTQCKNTKQTSTKRRVRDKQRQRTTQKHQTQRTTHKPTNQWATGADFGRLSSTEIAESMV ILDYIEDHPCRIENGLSDEDLQLSVTICTDDLIYIEITDCRFPPLVSNAAGLQSNGIGIFSRVVFTCKEGFFPNRYDAEI TCMENGTWTNTQFRCIKICGPGQEDRGDGCQDCKAGTYSDTVGTEPCQDCLAGTYQNKAGQTSCELCPLGTWMRYEGQTS CWNCYEGTYMNDTGATNCYKCPDDHYQDASRQTHCLLCSIHDNPCGQPYKIKHTNLTVAPSTDGKYCLATYQCLGLKQGS LLEDEVSVACRRYENEFNWIEPNFDCHDSPLTQKVPGKPYPCQTWLRMHTIHKYTYYCENIYDEGSWTIIQQRFSERNSS SFDKTYAEYEEGFGPTMDEDYWIGNKALSELTKVSIELVIFVWNDENRQLTARYATFRVKPENFTLHIAGYEADKSDLVD CLQYANGSIFFTKDEDSSWNCSTKQESGWWFNVERSGYTHCQYCGNVNNLFGSRTYKKSRIMIKKMGHSFFV |
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