Gene
| Gene Model ID | pfu_aug2.0_920.1_01249 |
|---|---|
| Locus | scaffold920.1 : 167506 ... 204435 : - |
| To GenomeBrowser | scaffold920.1:167506..204435 |
| Genes list of scaffold | scaffold920.1 |
| Synonym | pfu_aug1.0_22618.1_69505 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_920.1_01249.t1 | 3 | 1 | CRS1_YhbY | 107 | 140 | 8.4e-08 | 32.1 | 0.00048 | 1.0 | 9.4 |
| pfu_aug2.0_920.1_01249.t1 | 2 | 1 | EGF | 288 | 312 | 2.7e-07 | 30.4 | 1.7e-05 | 0.037 | 14.0 |
| pfu_aug2.0_920.1_01249.t1 | 3 | 2 | CRS1_YhbY | 359 | 391 | 8.4e-08 | 32.1 | 0.00052 | 1.1 | 9.3 |
| pfu_aug2.0_920.1_01249.t1 | 2 | 2 | EGF | 541 | 571 | 2.7e-07 | 30.4 | 8.7e-08 | 0.00018 | 21.3 |
| pfu_aug2.0_920.1_01249.t1 | 3 | 3 | CRS1_YhbY | 733 | 766 | 8.4e-08 | 32.1 | 0.00048 | 1.0 | 9.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_920.1_01249.t1 | gi|676448976|ref|XP_009051905.1| | hypothetical protein LOTGIDRAFT_159323 [Lottia gigantea] | 1.0e-20 |
| pfu_aug2.0_920.1_01249.t1 | gi|676448973|ref|XP_009051904.1| | hypothetical protein LOTGIDRAFT_159322 [Lottia gigantea] | 1.0e-14 |
| pfu_aug2.0_920.1_01249.t1 | gi|221123623|ref|XP_002156977.1| | PREDICTED: uncharacterized protein LOC100201344 [Hydra vulgaris] | 1.0e-12 |
| pfu_aug2.0_920.1_01249.t1 | gi|359720335|gb|AEV54352.1| | chondroitin sulfate proteoglycan 2 isoform V1c [Xenopus laevis] | 6.0e-06 |
| pfu_aug2.0_920.1_01249.t1 | gi|158138921|gb|ABN04220.2| | chondroitin sulfate proteoglycan 2 [Xenopus laevis] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_920.1_01249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_920.1_01249.t1 atggaatcctatcgtcgtagtcagagtgcaagtcttaagacaagacagggaacggaacaccaaatgtatcatcaaaacac cgaacacaaaagacttcacataaacaaacgagaccattcgtcaatcggcgctgacatctgtaacggtagtagaaaatggc gtggatatcacgattcctgtaaagacatcttcatcggcggtaatacgaaaaacggaacgtaccagatttacaaccgtaag aaccaagcctactttgtgtactgtgagtttcataataactatggctacacatatgtatcaagaacgaccaaggttggaat aaatatagatgacctttactcaacaagagaacatgccaagattagaattcagaaaaatgacaggacccaggctgaaacaa cagttgagaacctcgccagatataaaacacagtatcctctcaccttcttctacaacaaaaataatggatttgccacacct ataaatcatgcagctcttggaccttacctttacctcggattccttccagtttctgcagccaatcacgtccaacctcaagg atacagagcaggaggtagagactttccatttaataactgtgaccgtaatccaaacagttatatcgctttcttctttgaca caaactcacacaaagaagtagcttactccaacacagattatcctttaatgcatggttggatcaatgtagctagggacata ccaaccttaagcgatatgccagatgaattttactttttatatgagatgcacatgggaggatgtggaggctacgctgtggc acatcaacatgataatctattgggtgccgcgttgggattcagattcgatgtaaaagatccatgtgagaacaatccgtgtc agaatggtggcacctgtttctccgtgacagagacctcatatgactattcctgtaaagacatcttcatcggcggtaatacg aaaaacggcacgtaccagatttacaaccgtaagaaccaagcgtactttgtgtactgtgagtttcataataactatggcta cacatacgtatcaagaactaccacggttggaataaatatagatgacctttactcaacaagagaacatgccaagattagaa ttcagaaaaatgacaggacccaggctgaaacaacagttgagaaccttgccagatataaaacacagtatcctctcaccttc ttctacaacagaaataatggatttgccacgcctataaaccatgcagctcttggaccatacctttatctcggattcctgcc agtttccgcagccaatcacgcccaacctcaaggatacagagctggaggcagagactttccatttaataattgtgaccaca atccaaacagttatatcgctttcttctttaatcccaactcacacaaagaagcagcgtactctaatatcaacgtagattgg cctttaatgcatggttggattaatgtagcaaagaacataccaacctcaagtcatatgtcggatgattattactttttata tgagatgcacatgggaggatgcggaggctacgctgtggcacatcaccatgataatgtactgggcgcagcattgggactca ggttcgatgtaaaagatccatgtaagaacaatccgtgtcagaatggtggcacctgtttctccgtgacagagacctcttat gactgtgagtgtacacagggtcatttaggaaagcgttgtgaatttgggaaaagatacttagcttctgacttcaacttcac taacagatacatagacgatgtgttgtccatcaataatccaaaattcgcggattacctgagtagtatctatccttcgaagc ttgaagtcaaagaaacgacaaataattcagcatcctatttggacataatgttgtcttacgacactgatggtcacatggac acctcactctatgacaaacgtgacgacttcaatttcagcattacaaactttccttttctgagtagaaacataccttcatc gcctgcttatggcgtgttcatatctcagttgatacgctatgccagagcaaattcctgtaaagacattttcatcggcggta atacgaaaaacggcacgtaccagatttacaaccgtaagaaccaagcgtactttgtgtactgtgagtttcataataactat ggctacacatacgtatcaagaacgaccaaggttggaataaatatagatgacctttactcaacaagagaacatgccaagat tagaattcagaaaaatgacaggacccaagctgaaacaacagttgagaacctcgccagatataaaacacagtaccctctca ccttcttctacaacagaaataatggatttgccacacctataaatcatgcagctcttggaccttacctttacctcggattc ctgccagattctgcagccaatcgcgttcaacctcaaggatacagagctggaggcagagactttccatttaataattgtga ccacaatccaaacagttatatcgctttcttctttaatcccaactcacacaaagaagcagcgtactctaatatcaacgtag attggcctttaatgcatggttggattaatgtagcaaagaacataccaacctcaagtcatatgtcggatgatttttacttt ttatatgagatgcacatgggaggatgcggaggctacgctgtggcacatcaccatgataatgtactgggcgcagcattggg tctcaggttcggtacgtga |
|
Protein
| Protein ID | pfu_aug2.0_920.1_01249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_920.1_01249.t1 MESYRRSQSASLKTRQGTEHQMYHQNTEHKRLHINKRDHSSIGADICNGSRKWRGYHDSCKDIFIGGNTKNGTYQIYNRK NQAYFVYCEFHNNYGYTYVSRTTKVGINIDDLYSTREHAKIRIQKNDRTQAETTVENLARYKTQYPLTFFYNKNNGFATP INHAALGPYLYLGFLPVSAANHVQPQGYRAGGRDFPFNNCDRNPNSYIAFFFDTNSHKEVAYSNTDYPLMHGWINVARDI PTLSDMPDEFYFLYEMHMGGCGGYAVAHQHDNLLGAALGFRFDVKDPCENNPCQNGGTCFSVTETSYDYSCKDIFIGGNT KNGTYQIYNRKNQAYFVYCEFHNNYGYTYVSRTTTVGINIDDLYSTREHAKIRIQKNDRTQAETTVENLARYKTQYPLTF FYNRNNGFATPINHAALGPYLYLGFLPVSAANHAQPQGYRAGGRDFPFNNCDHNPNSYIAFFFNPNSHKEAAYSNINVDW PLMHGWINVAKNIPTSSHMSDDYYFLYEMHMGGCGGYAVAHHHDNVLGAALGLRFDVKDPCKNNPCQNGGTCFSVTETSY DCECTQGHLGKRCEFGKRYLASDFNFTNRYIDDVLSINNPKFADYLSSIYPSKLEVKETTNNSASYLDIMLSYDTDGHMD TSLYDKRDDFNFSITNFPFLSRNIPSSPAYGVFISQLIRYARANSCKDIFIGGNTKNGTYQIYNRKNQAYFVYCEFHNNY GYTYVSRTTKVGINIDDLYSTREHAKIRIQKNDRTQAETTVENLARYKTQYPLTFFYNRNNGFATPINHAALGPYLYLGF LPDSAANRVQPQGYRAGGRDFPFNNCDHNPNSYIAFFFNPNSHKEAAYSNINVDWPLMHGWINVAKNIPTSSHMSDDFYF LYEMHMGGCGGYAVAHHHDNVLGAALGLRFGT |
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