Gene
| Gene Model ID | pfu_aug2.0_922.1_08011 |
|---|---|
| Locus | scaffold922.1 : 50526 ... 70376 : + |
| To GenomeBrowser | scaffold922.1:50526..70376 |
| Genes list of scaffold | scaffold922.1 |
| Synonym | pfu_aug1.0_15333.1_54175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_922.1_08011.t1 | 5 | 1 | HSP70 | 2 | 279 | 3.2e-15 | 55.1 | 2.1e-19 | 3.2e-15 | 55.1 |
| pfu_aug2.0_922.1_08011.t1 | 5 | 2 | HSP70 | 234 | 329 | 3.2e-15 | 55.1 | 1.0 | 15000.0 | -8.2 |
| pfu_aug2.0_922.1_08011.t1 | 5 | 3 | HSP70 | 318 | 435 | 3.2e-15 | 55.1 | 8.9e-05 | 1.3 | 6.8 |
| pfu_aug2.0_922.1_08011.t1 | 5 | 4 | HSP70 | 528 | 589 | 3.2e-15 | 55.1 | 1.0 | 15000.0 | -7.4 |
| pfu_aug2.0_922.1_08011.t1 | 5 | 5 | HSP70 | 575 | 650 | 3.2e-15 | 55.1 | 1.0 | 15000.0 | -16.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_922.1_08011.t1 | gi|676492564|ref|XP_009065959.1| | hypothetical protein LOTGIDRAFT_222757 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_922.1_08011.t1 | gi|524901669|ref|XP_005107239.1| | PREDICTED: hypoxia up-regulated protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_922.1_08011.t1 | gi|260830248|ref|XP_002610073.1| | hypothetical protein BRAFLDRAFT_125669 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_922.1_08011.t1 | gi|617605120|ref|XP_007523655.1| | PREDICTED: hypoxia up-regulated protein 1 [Erinaceus europaeus] | 0.0 |
| pfu_aug2.0_922.1_08011.t1 | gi|562846985|ref|XP_006152362.1| | PREDICTED: hypoxia up-regulated protein 1 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_922.1_08011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_922.1_08011.t1 atgggtggtggtacacgagtacccaaaatacaagatcttctgttaaaattccttggaagaagtggattgggtaagagtat taacacagatgaggccgcggcgctcggagccgtttatcatgctgctcatctcggaaaaggattcaaagtcaaaaagtttg gtgtcaaagaggcgtgtctatatccaatagtggtggagtttgagaaacagaaagaaggtgaggagacgtccaagacggta cgacgtacgctttttggtcgtatgaatccatacccccagaagaaggtcatgacctttaacaagcacttcaaggacttcaa cttcaatgtctcatatggagatctgtcgttccttacagacgaggagttaaaaatgtttaaagagtctgctatccattcgt tttccctgtctggtgtagaaacagcccataccaaacataaggaaaaggcagagagtaaaggtgttaaagctcacttcaga atggacgaaagtgggattctacatctagacacggctgaggcggtgtttgagacagaaggagatgcaaaagaagaatccac ttggtcaaagttaggcgataccatcagtgggctgttcggaggctcagacaaaaaagagaagaaagacgaaggtgccgagg agcaagttcccgagggggataactctggcaagccaacagagggcgcctccgagcaagagaagacaactacccaggattcc cagaaggaggacagtgaaaagggaggcaatgataaaaccaaagaaaagatcactgcagaggaagaggaaaagaaagatga caaaaaagacaatgagaaaactgaggaaaagaaggataaaaaatcagaagaaaaatcagagggaaaaacggaggaaaaaa agggaaataaaacagaggaaggaagtgataaaggaaataaaactacaactgaaaagaaagaggaaaaacctaaagtatct gtcataaaggaggagattgcagtacagaataaaacatttgagattccgagtataacgaaagaaagtaaaaaagccagtaa gaagaaactttcagatcttgcggccaaagacaaagagaagaaattactagagaaagccaagaacaacttggagtcgttta tatttaatacgggagacaagttgacccaggaggagtatgagaagtgttctacagagggcgagagggaggatattaataag gcattagccgaggcctcggactggatgtacgaccaagatgacgatgctaaaagagaggtatacaccggcaaactttcgga acttaaaaagttgacaaaggatttagaattccgtgtgaaggagtacaaggagagacctaaagctctggaggccctacatg acatgattaatagtacagaattcttcctagtgacgcttaaaaatatgtctcagttagaagaacctatatttaccgaagtg gaaattacgacgctatcaaaattaataaatgaaacaaaggattggagggacaatttagttcaagaacaagaaggccaacc ccttactgaaaagcctaaactattggtagaggacctgggtgtcaaatactacgcactagatagagaagtcaaatatctca taaataaggccaaaaactataggccaaaagccaagcctaaaaaatcaaccaatgaaacggaaggaaagaaatctgcagcc aatgaaacgaaaggtacagatgataaaacagccaatgatacaaaagatacagatcaagaatcaaccaataaaaatacaga acaaaaagcagataattcagatgggccacaaatagacattcctacatccacagacaagccgacaaaacggcgaccaaaac aaaaacggggagaacaaaaatcagacgataacgaagaaattttacaattagatgaagccgattcagcacagaatacagaa agcacacaaaacacagaaagcacagagagcacaacacaacaaacacaatcaactacagaggagcatgtcacgcacgacgc tggagatttataa |
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Protein
| Protein ID | pfu_aug2.0_922.1_08011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_922.1_08011.t1 MGGGTRVPKIQDLLLKFLGRSGLGKSINTDEAAALGAVYHAAHLGKGFKVKKFGVKEACLYPIVVEFEKQKEGEETSKTV RRTLFGRMNPYPQKKVMTFNKHFKDFNFNVSYGDLSFLTDEELKMFKESAIHSFSLSGVETAHTKHKEKAESKGVKAHFR MDESGILHLDTAEAVFETEGDAKEESTWSKLGDTISGLFGGSDKKEKKDEGAEEQVPEGDNSGKPTEGASEQEKTTTQDS QKEDSEKGGNDKTKEKITAEEEEKKDDKKDNEKTEEKKDKKSEEKSEGKTEEKKGNKTEEGSDKGNKTTTEKKEEKPKVS VIKEEIAVQNKTFEIPSITKESKKASKKKLSDLAAKDKEKKLLEKAKNNLESFIFNTGDKLTQEEYEKCSTEGEREDINK ALAEASDWMYDQDDDAKREVYTGKLSELKKLTKDLEFRVKEYKERPKALEALHDMINSTEFFLVTLKNMSQLEEPIFTEV EITTLSKLINETKDWRDNLVQEQEGQPLTEKPKLLVEDLGVKYYALDREVKYLINKAKNYRPKAKPKKSTNETEGKKSAA NETKGTDDKTANDTKDTDQESTNKNTEQKADNSDGPQIDIPTSTDKPTKRRPKQKRGEQKSDDNEEILQLDEADSAQNTE STQNTESTESTTQQTQSTTEEHVTHDAGDL |
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