Gene
| Gene Model ID | pfu_aug2.0_922.1_08012 |
|---|---|
| Locus | scaffold922.1 : 71006 ... 99869 : + |
| To GenomeBrowser | scaffold922.1:71006..99869 |
| Genes list of scaffold | scaffold922.1 |
| Synonym | pfu_aug1.0_15333.1_54175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_922.1_08012.t1 | 4 | 1 | GCC2_GCC3 | 204 | 245 | 7.8e-10 | 38.1 | 1.3e-06 | 0.0027 | 17.2 |
| pfu_aug2.0_922.1_08012.t1 | 4 | 2 | GCC2_GCC3 | 257 | 272 | 7.8e-10 | 38.1 | 0.0022 | 4.6 | 6.9 |
| pfu_aug2.0_922.1_08012.t1 | 4 | 3 | GCC2_GCC3 | 275 | 313 | 7.8e-10 | 38.1 | 2.2e-06 | 0.0047 | 16.4 |
| pfu_aug2.0_922.1_08012.t1 | 4 | 4 | GCC2_GCC3 | 290 | 317 | 7.8e-10 | 38.1 | 6.0e-05 | 0.13 | 11.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_922.1_08012.t1 | gi|260809656|ref|XP_002599621.1| | hypothetical protein BRAFLDRAFT_77720 [Branchiostoma floridae] | 5.0e-14 |
| pfu_aug2.0_922.1_08012.t1 | gi|514689765|ref|XP_004992457.1| | hypothetical protein PTSG_12529 [Salpingoeca rosetta] | 6.0e-13 |
| pfu_aug2.0_922.1_08012.t1 | gi|545702876|ref|XP_005703766.1| | protein kinase, putative (ISS) [Galdieria sulphuraria] | 2.0e-12 |
| pfu_aug2.0_922.1_08012.t1 | gi|675200527|ref|XP_008909148.1| | hypothetical protein PPTG_14319 [Phytophthora parasitica INRA-310] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_922.1_08012.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_922.1_08012.t1 atgttactagtaaatgtgagtgaagatggctgtgacgattttaatagttccgatagtttatttgacgatggagattatta cgattactattattattattttcgggaatattatttcacagaagaagagcggaaaagatttaattgtacagatagctatc caaactataggatggtattgactttacttctaaaccaagacaatttgcttgctattaagctttctgtcgttggacttctt ttccttggattattaggcaatgcaataactattatcaaagtgttgtgtgataaaactttacacacaccgacatacacatt ggtcgtctgcttggcagtgtgtgatatactgaaccttgtcttaacatatgttgtgtattacacaaacctgagagactact tggacttcacatttcggacaaaagtcatcacaatttacatggaattgataagcttctctgtcagggatacgtttgtgaca gactcactgaggaagttctacggacgatacggggaacttgtcatacactataatgccccattgttcagaatggtggataa tatttatttgaaccatccaatcacagaatatacttgtgcttccgaaataaacttcacacagtgtgtgtcgtgtgctgccg ggacgtacaagaacttcacaggtgaggacagctgtccgttgtgccccatgacttactaccaagacgaacctggtcaaacc ggatgtaaacaatgtcagaatacaaccgaatggagattcggaagtaataccgacagaacaggatgttggaaatgtccgat tggaatgtacagaaacttcacacagtgtgtgtcgtgtgctgccgggacgtacaagaacttcacaggtgaggacagctgtc cgttgtgccccatgacttactaccaagacgaacctggtcaaaccggatgtaaacaatgtcagaatacaaccgaatggaga ttcggaagtaataccgacagaacaggatgttggagtaagaacagttcttaa |
|
Protein
| Protein ID | pfu_aug2.0_922.1_08012.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_922.1_08012.t1 MLLVNVSEDGCDDFNSSDSLFDDGDYYDYYYYYFREYYFTEEERKRFNCTDSYPNYRMVLTLLLNQDNLLAIKLSVVGLL FLGLLGNAITIIKVLCDKTLHTPTYTLVVCLAVCDILNLVLTYVVYYTNLRDYLDFTFRTKVITIYMELISFSVRDTFVT DSLRKFYGRYGELVIHYNAPLFRMVDNIYLNHPITEYTCASEINFTQCVSCAAGTYKNFTGEDSCPLCPMTYYQDEPGQT GCKQCQNTTEWRFGSNTDRTGCWKCPIGMYRNFTQCVSCAAGTYKNFTGEDSCPLCPMTYYQDEPGQTGCKQCQNTTEWR FGSNTDRTGCWSKNSS |
|