Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_922.1_08013
Locus scaffold922.1 : 127229 ... 135725 : -
To GenomeBrowser scaffold922.1:127229..135725
Genes list of scaffold scaffold922.1
Synonym pfu_aug1.0_29345.1_33711

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_922.1_08013.t1 1 1 HSP70 168 459 9.4e-07 27.1 2.6e-09 1.3e-05 23.3

Transcript
Transcript IDpfu_aug2.0_922.1_08013.t1
Definition-
>pfu_aug2.0_922.1_08013.t1
atggatgagcacgtccaacaagtaacggaatcgaagatggaggaatctggctttgaggaagaatctgatgtgtgtatgag
aatggaacaaacgagtttaacgaagaaaacgtacttagcatctgtagccattgactttggtactacatattctggatatg
cgttctcctttgacgctgatttcaaacgtgatcctttgagtatatctgctgatccatggattagctcgggaggacccggt
caattatcactgaaaacgccaacatctttgttgttgtcccatgataggtcgtttttagccttcggatatgaagcagaaga
acagtacgctaatctggctttagacgacgaacatcatgagcatttcttcttcaaaacattcaaaatgcagctgtacaata
acaagactggctgtgacttgatagaggacataaatggaaaagccctacccagtattacagtctttgctgagtccataagg
ttcttgaaaagacatttctggaaaaagctacagtctctcggacatgactctataaaggatgatgaaattagatgggtgct
tacagtaccggctatctgggatgattttgcaaaaagattaatgagacaggcggctatccaggcggggattcttgatgaca
acttgatcctggctttggagccggaggctgcctcactgtattgtcagcatctatacacacgaaaaaaccaggaggaattt
gatgtaacaaaagagggaacaaaattcatggttcttgatctaggaggtggcacagcagacataacagtacaagaaaaatt
agagaatggtaaactcagagaaatccagagggctactggaggaccgtttggagggtcagccgtcaatgatgcatttatta
tgctgcttgggaaaattgtaggatctgaagtcatggggaagttcaaaatggctcatctgtatgatttcatggacttacaa
acttcatttgaggtggcaaaacgatcagtagcttacaaatcgaatacactgaaaacgttcaatttaagaataccggcctc
gttgaatgagatgataaaagttgaaagaggaacaacgtttgcagaaattttacaagcagaccaaacctttcgcaacttga
taactttaaagaaagacaaactttgcatcgatcatacaattatcatgcagatattcatgaaagtcatcactgagatatgt
aggcatgtctctgatgtgctagacgcaccagatggaaacgacatatccctcatacagatggtaggtggtttctccgagtc
ttcatttgttcaggaaattatgagagaaaagttccatacccagaatcgacatgttctcattccccaggaagcgggtatgg
ctgttttaaaaggtgctgtcattttcggccattctccaactagcatagattcccgtataatacgctacacgtatggaaat
gcagtcaaagttccatttcaagatggcgttcacgatgagcgaaagagatgggatgatggtaaaaaagtttggtgtcaaaa
tgtcttcaaaccttttatgaaagcaggaacttcggtcaaaattggacatacttttgttgacaggagacccacttctcatt
atgaaactgcaaggatgaaaatatatgtgaccgacaatgacgatacgatgtacgttacagacgagggttgccgagaatta
tgtaatgttcttttaaacgaggtactacctgctgacgtcacgatcagacagaaagtaatgcagacgatagtgtttggtga
aactgagctcgacatacagattaagaacaaaagcacgcgacaaactcacaggctgagcctcaaaatgaaagaagcggaat
aa

Protein
Protein IDpfu_aug2.0_922.1_08013.t1
Definition-
>pfu_aug2.0_922.1_08013.t1
MDEHVQQVTESKMEESGFEEESDVCMRMEQTSLTKKTYLASVAIDFGTTYSGYAFSFDADFKRDPLSISADPWISSGGPG
QLSLKTPTSLLLSHDRSFLAFGYEAEEQYANLALDDEHHEHFFFKTFKMQLYNNKTGCDLIEDINGKALPSITVFAESIR
FLKRHFWKKLQSLGHDSIKDDEIRWVLTVPAIWDDFAKRLMRQAAIQAGILDDNLILALEPEAASLYCQHLYTRKNQEEF
DVTKEGTKFMVLDLGGGTADITVQEKLENGKLREIQRATGGPFGGSAVNDAFIMLLGKIVGSEVMGKFKMAHLYDFMDLQ
TSFEVAKRSVAYKSNTLKTFNLRIPASLNEMIKVERGTTFAEILQADQTFRNLITLKKDKLCIDHTIIMQIFMKVITEIC
RHVSDVLDAPDGNDISLIQMVGGFSESSFVQEIMREKFHTQNRHVLIPQEAGMAVLKGAVIFGHSPTSIDSRIIRYTYGN
AVKVPFQDGVHDERKRWDDGKKVWCQNVFKPFMKAGTSVKIGHTFVDRRPTSHYETARMKIYVTDNDDTMYVTDEGCREL
CNVLLNEVLPADVTIRQKVMQTIVFGETELDIQIKNKSTRQTHRLSLKMKEAE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495