Gene
| Gene Model ID | pfu_aug2.0_923.1_11311 |
|---|---|
| Locus | scaffold923.1 : 185667 ... 201582 : - |
| To GenomeBrowser | scaffold923.1:185667..201582 |
| Genes list of scaffold | scaffold923.1 |
| Synonym | pfu_aug1.0_7577.1_38577 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_923.1_11311.t1 | 1 | 1 | CRAL_TRIO | 35 | 201 | 4.7e-38 | 130.1 | 1.29998e-41 | 6.6e-38 | 129.6 |
| pfu_aug2.0_923.1_11311.t1 | 3 | 1 | CRAL_TRIO_2 | 89 | 202 | 1.0e-07 | 31.9 | 5.9e-11 | 2.9e-07 | 30.5 |
| pfu_aug2.0_923.1_11311.t1 | 3 | 2 | CRAL_TRIO_2 | 223 | 237 | 1.0e-07 | 31.9 | 1.9 | 9600.0 | -3.7 |
| pfu_aug2.0_923.1_11311.t1 | 2 | 1 | GOLD_2 | 242 | 279 | 3.6e-11 | 43.4 | 0.00013 | 0.62 | 10.2 |
| pfu_aug2.0_923.1_11311.t1 | 2 | 2 | GOLD_2 | 284 | 338 | 3.6e-11 | 43.4 | 3.4e-11 | 1.7e-07 | 31.5 |
| pfu_aug2.0_923.1_11311.t1 | 3 | 3 | CRAL_TRIO_2 | 312 | 330 | 1.0e-07 | 31.9 | 1.9 | 9200.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_923.1_11311.t1 | gi|585691781|ref|XP_006894845.1| | PREDICTED: SEC14-like protein 2 isoform X3 [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_923.1_11311.t1 | gi|586477523|ref|XP_006869301.1| | PREDICTED: SEC14-like protein 2 isoform X1 [Chrysochloris asiatica] | 0.0 |
| pfu_aug2.0_923.1_11311.t1 | gi|511893697|ref|XP_004766495.1| | PREDICTED: SEC14-like protein 2 [Mustela putorius furo] | 0.0 |
| pfu_aug2.0_923.1_11311.t1 | gi|558198509|ref|XP_006104950.1| | PREDICTED: SEC14-like protein 2 [Myotis lucifugus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_923.1_11311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_923.1_11311.t1 atgcgtggtatggaggctgcatctgacctacatttcatgcagcacatagcatggcgtaagatgtacgatgtagacaatat atttgagtggaagatgccagaggtacttaattattatacaggaggttggtttgggttcgacaaagaaggttaccctctgt ggctagacccatttggaaaagctgacatcaaaggaatgttacgatcagcaactaaggatgagtgcaggaaagccaaaatc caggcactagaagaggcatttgtacatatatgtggtgaacagtccaaaaagctgaacaagaagattgatcaaatagtagt aatttatgatatggaggattttggatggaaacatttatcatggaaaccaggggtggaagcttatttggaactggtccgta tgttcgaagccaattatcctgaaacactcaagaaaatcgtggttgtaaatgcacccagattgtttcctattgcctataac attgtcaaaccattcatggctgaggcaacagtaaagaaagtagctatacttggaaagaacttcaaagatactttgttaga gtttatagatgctgatcagttacctgtgtcatttggtggtaccaggactgaccctgacggggatatctactgtaaatcac aggtttcccaaggaggagaagtcccaaaaaagttctacaagactgttgaccaatcagaactggataatttgacgctaggg actgtaaaaagcgggtcatctctacaagtggaatgtgaagtcactttacctaacagtgcaattagatggtcgttttccac agtgggagatgatctaggttttggggtatataagaggacaaaagaaggaaagcagaaagtggctgacatggaagaggtga ttgccaatagacgggtaaactgccatatggtgccagaggacggcactatagcatgtaaaactactggcatgtacattgtt aggtttgacaacagttacagctggttaaagaacaagaaggtgtattatgatgtagaagtgttggaaccggacatagatta ccctaaccccagcagctcacagacaaatatagtctccatgggggacggagccacagcaggggataacgcctcttga |
|
Protein
| Protein ID | pfu_aug2.0_923.1_11311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_923.1_11311.t1 MRGMEAASDLHFMQHIAWRKMYDVDNIFEWKMPEVLNYYTGGWFGFDKEGYPLWLDPFGKADIKGMLRSATKDECRKAKI QALEEAFVHICGEQSKKLNKKIDQIVVIYDMEDFGWKHLSWKPGVEAYLELVRMFEANYPETLKKIVVVNAPRLFPIAYN IVKPFMAEATVKKVAILGKNFKDTLLEFIDADQLPVSFGGTRTDPDGDIYCKSQVSQGGEVPKKFYKTVDQSELDNLTLG TVKSGSSLQVECEVTLPNSAIRWSFSTVGDDLGFGVYKRTKEGKQKVADMEEVIANRRVNCHMVPEDGTIACKTTGMYIV RFDNSYSWLKNKKVYYDVEVLEPDIDYPNPSSSQTNIVSMGDGATAGDNAS |
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