Gene
| Gene Model ID | pfu_aug2.0_923.1_11312 |
|---|---|
| Locus | scaffold923.1 : 203683 ... 204798 : + |
| To GenomeBrowser | scaffold923.1:203683..204798 |
| Genes list of scaffold | scaffold923.1 |
| Synonym | pfu_aug1.0_47307.1_63287 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_923.1_11312.t1 | 5 | 1 | NHL | 113 | 127 | 7.1e-08 | 32.0 | 0.24 | 1200.0 | -0.3 |
| pfu_aug2.0_923.1_11312.t1 | 5 | 2 | NHL | 160 | 180 | 7.1e-08 | 32.0 | 0.00012 | 0.61 | 10.1 |
| pfu_aug2.0_923.1_11312.t1 | 5 | 3 | NHL | 208 | 231 | 7.1e-08 | 32.0 | 5.3e-08 | 0.00026 | 20.7 |
| pfu_aug2.0_923.1_11312.t1 | 5 | 4 | NHL | 232 | 243 | 7.1e-08 | 32.0 | 0.093 | 460.0 | 1.0 |
| pfu_aug2.0_923.1_11312.t1 | 5 | 5 | NHL | 252 | 268 | 7.1e-08 | 32.0 | 1.6 | 8100.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_923.1_11312.t1 | gi|260820411|ref|XP_002605528.1| | hypothetical protein BRAFLDRAFT_245347 [Branchiostoma floridae] | 2.0e-08 |
| pfu_aug2.0_923.1_11312.t1 | gi|410910292|ref|XP_003968624.1| | 4.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_923.1_11312.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_923.1_11312.t1 atggcctcaaacaaagacactagcacggggaggaaggtaaagattctatcaaagataaagacagacagtgataatgcccc atgtatcaaggccttactgaaccatcgctgctggatgacgagtacaggcaggaaaggcttagtcctgatagacaaggccg gtacacaacaacgggagatagatctgtctgaatgttattatgaggtgtttaattttgacatggacaaagaagaaaatgtc tacttccagacaatggaaaccatggatcataacctatacaagtatgacaatgccgaaggggaaattgaagattttgatga aatttggccgttcgatgcctggggtatacacgttactaaagatggtggcattctaacagcccagaattctgaagaggatg gcggtaaatgtgtactgtacacatctgggggagaggaatctatggtgatacaatataagggagagaatgacccgtacttt gactaccctatagatgtgaccgacttaaactcaggagatatatgtgtggctgacctatataaacctggggtctttatatt tgacaaggaaggggaattgaagactttgtacagtggaacaaacttaaatctcctgaaaaactaccatccacattcagtgg cttgtgactctagcaacaatatatttatactggacaaggagaacaaacggattgacgttattgacaaagacggagtgtat gtctgtgaattgatgacagagtgtgacggactgaaagacccggacagtatatctataggagaagatggtgtaatgtgggt gactcagtacaaaaaagaaaccctagttatagaatatatcttgtaa |
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Protein
| Protein ID | pfu_aug2.0_923.1_11312.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_923.1_11312.t1 MASNKDTSTGRKVKILSKIKTDSDNAPCIKALLNHRCWMTSTGRKGLVLIDKAGTQQREIDLSECYYEVFNFDMDKEENV YFQTMETMDHNLYKYDNAEGEIEDFDEIWPFDAWGIHVTKDGGILTAQNSEEDGGKCVLYTSGGEESMVIQYKGENDPYF DYPIDVTDLNSGDICVADLYKPGVFIFDKEGELKTLYSGTNLNLLKNYHPHSVACDSSNNIFILDKENKRIDVIDKDGVY VCELMTECDGLKDPDSISIGEDGVMWVTQYKKETLVIEYIL |
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