Gene
| Gene Model ID | pfu_aug2.0_925.1_17940 |
|---|---|
| Locus | scaffold925.1 : 75904 ... 84435 : - |
| To GenomeBrowser | scaffold925.1:75904..84435 |
| Genes list of scaffold | scaffold925.1 |
| Synonym | pfu_aug1.0_22057.1_04191 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_925.1_17940.t1 | 1 | 1 | RAI1 | 241 | 304 | 7.1e-22 | 76.9 | 1.1e-25 | 1.6e-21 | 75.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_925.1_17940.t1 | gi|524906384|ref|XP_005108505.1| | PREDICTED: decapping and exoribonuclease protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_925.1_17940.t1 | gi|676488117|ref|XP_009064515.1| | hypothetical protein LOTGIDRAFT_54612, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_925.1_17940.t1 | gi|585686363|ref|XP_006820314.1| | PREDICTED: decapping and exoribonuclease protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_925.1_17940.t1 | gi|260824603|ref|XP_002607257.1| | hypothetical protein BRAFLDRAFT_88205 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_925.1_17940.t1 | gi|638274210|ref|NP_001279932.1| | decapping exoribonuclease [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_925.1_17940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17940.t1 atgaaaagaaactgggataaacatgaatatcagaatgaaaaacgccgaagaacagaccaattttctactttcactttgca tcccagaaacaaatacaaaggaaagttccctatgtttcggaaaccatgtgaagtagggaacttttcacttgatattgata gaatttttaatgatggaaaagacatgatgaagtattatcataaaccagacaaacctggaaatgtctgttttgatttgaaa ctcggatacaagtccatggtcagaaaagatgagagccaagacgagttaataaatgacatcctcagatggatcatgcgtaa caggaaatgtttccaaactgcagaggatcaagcaacaattacagattcaaaaccctcaaggaaccttcatacagattttg tctgctggcgagggttgctaaccaaactgctctgcaccccatacgagagtcgtgatggttggaagatagctgtaacatta cacaagggaacatattacatgaatgagtacgagacggaaaagaagaaatcggacaaggcagctacaacagaacaacaaga tcagatggcttactggggatggaaatttgaacagtatgtatcaacttcagaaccaaatggaataccagatacagacagtc ctgtaaacaattgtgaagcatactgtatagttataaggtctcgtcttgaaaagcattccatagtttactctggagaagta gacgctgttgatctcgactgctcctcagaaaataaatacgtagagtttaaaacttccagggagatagacacacctagaca agatcagaattttaaaagatttaagcttatcaaatggtgggcccagagttatttggtagggattccacttatagtatgtg gattaagggacgatgatggaattgtacacagactgcagaattttgaaactgctaaaattcctgacatagttaaggatctg agggacccgtgggaaccaaatgtttgtttcaacttcctcaatcaattcttggaatttgtgaaaagaacagtcactacaga taatcacaaggtggtctacctgtttgagtgggagccttcaggggacattggttgtaggaggttagaggaggggtcaagtt attgcttcctacctgactggtacgtaaatgactga |
|
Protein
| Protein ID | pfu_aug2.0_925.1_17940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17940.t1 MKRNWDKHEYQNEKRRRTDQFSTFTLHPRNKYKGKFPMFRKPCEVGNFSLDIDRIFNDGKDMMKYYHKPDKPGNVCFDLK LGYKSMVRKDESQDELINDILRWIMRNRKCFQTAEDQATITDSKPSRNLHTDFVCWRGLLTKLLCTPYESRDGWKIAVTL HKGTYYMNEYETEKKKSDKAATTEQQDQMAYWGWKFEQYVSTSEPNGIPDTDSPVNNCEAYCIVIRSRLEKHSIVYSGEV DAVDLDCSSENKYVEFKTSREIDTPRQDQNFKRFKLIKWWAQSYLVGIPLIVCGLRDDDGIVHRLQNFETAKIPDIVKDL RDPWEPNVCFNFLNQFLEFVKRTVTTDNHKVVYLFEWEPSGDIGCRRLEEGSSYCFLPDWYVND |
|