Gene
Gene Model ID | pfu_aug2.0_925.1_17942 |
---|---|
Locus | scaffold925.1 : 109246 ... 153193 : + |
To GenomeBrowser | scaffold925.1:109246..153193 |
Genes list of scaffold | scaffold925.1 |
Synonym | pfu_aug1.0_1478.1_37028 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_925.1_17942.t1 | 2 | 1 | EF-hand_7 | 169 | 219 | 7.7e-15 | 54.7 | 5.4e-09 | 8.0e-06 | 25.8 |
pfu_aug2.0_925.1_17942.t1 | 2 | 1 | EF-hand_8 | 172 | 220 | 7.3e-17 | 60.7 | 1.5e-10 | 2.2e-07 | 30.3 |
pfu_aug2.0_925.1_17942.t1 | 2 | 1 | STAT_bind | 172 | 217 | 1.2e-06 | 28.3 | 4.2e-05 | 0.063 | 12.8 |
pfu_aug2.0_925.1_17942.t1 | 2 | 1 | EF-hand_4 | 180 | 223 | 2.0e-06 | 27.4 | 9.4e-05 | 0.14 | 11.9 |
pfu_aug2.0_925.1_17942.t1 | 3 | 1 | EF-hand_1 | 195 | 219 | 4.7e-09 | 34.9 | 2.5e-06 | 0.0037 | 16.4 |
pfu_aug2.0_925.1_17942.t1 | 3 | 1 | EF-hand_6 | 195 | 219 | 6.6e-07 | 28.6 | 2.9e-05 | 0.044 | 13.6 |
pfu_aug2.0_925.1_17942.t1 | 9 | 1 | WD40 | 308 | 334 | 2.4e-31 | 106.4 | 0.0043 | 6.4 | 6.8 |
pfu_aug2.0_925.1_17942.t1 | 5 | 1 | Nucleoporin_N | 319 | 336 | 4.7e-08 | 32.2 | 0.99 | 1500.0 | -2.4 |
pfu_aug2.0_925.1_17942.t1 | 2 | 2 | EF-hand_7 | 476 | 526 | 7.7e-15 | 54.7 | 5.4e-09 | 8.0e-06 | 25.8 |
pfu_aug2.0_925.1_17942.t1 | 2 | 2 | EF-hand_8 | 479 | 527 | 7.3e-17 | 60.7 | 1.5e-10 | 2.2e-07 | 30.3 |
pfu_aug2.0_925.1_17942.t1 | 2 | 2 | STAT_bind | 479 | 524 | 1.2e-06 | 28.3 | 4.2e-05 | 0.063 | 12.8 |
pfu_aug2.0_925.1_17942.t1 | 2 | 2 | EF-hand_4 | 487 | 530 | 2.0e-06 | 27.4 | 9.4e-05 | 0.14 | 11.9 |
pfu_aug2.0_925.1_17942.t1 | 3 | 2 | EF-hand_1 | 502 | 526 | 4.7e-09 | 34.9 | 2.5e-06 | 0.0037 | 16.4 |
pfu_aug2.0_925.1_17942.t1 | 3 | 2 | EF-hand_6 | 502 | 526 | 6.6e-07 | 28.6 | 2.9e-05 | 0.044 | 13.6 |
pfu_aug2.0_925.1_17942.t1 | 9 | 2 | WD40 | 615 | 641 | 2.4e-31 | 106.4 | 0.0043 | 6.4 | 6.8 |
pfu_aug2.0_925.1_17942.t1 | 5 | 2 | Nucleoporin_N | 626 | 643 | 4.7e-08 | 32.2 | 0.99 | 1500.0 | -2.4 |
pfu_aug2.0_925.1_17942.t1 | 5 | 3 | Nucleoporin_N | 766 | 816 | 4.7e-08 | 32.2 | 0.92 | 1400.0 | -2.3 |
pfu_aug2.0_925.1_17942.t1 | 9 | 3 | WD40 | 788 | 816 | 2.4e-31 | 106.4 | 3.1e-06 | 0.0046 | 16.7 |
pfu_aug2.0_925.1_17942.t1 | 9 | 4 | WD40 | 824 | 859 | 2.4e-31 | 106.4 | 0.0058 | 8.5 | 6.4 |
pfu_aug2.0_925.1_17942.t1 | 5 | 4 | Nucleoporin_N | 936 | 1008 | 4.7e-08 | 32.2 | 1.1e-06 | 0.0016 | 17.2 |
pfu_aug2.0_925.1_17942.t1 | 9 | 5 | WD40 | 940 | 955 | 2.4e-31 | 106.4 | 0.42 | 620.0 | 0.5 |
pfu_aug2.0_925.1_17942.t1 | 9 | 6 | WD40 | 971 | 999 | 2.4e-31 | 106.4 | 1.2e-08 | 1.8e-05 | 24.4 |
pfu_aug2.0_925.1_17942.t1 | 9 | 7 | WD40 | 1063 | 1091 | 2.4e-31 | 106.4 | 1.9e-06 | 0.0028 | 17.4 |
pfu_aug2.0_925.1_17942.t1 | 5 | 5 | Nucleoporin_N | 1214 | 1248 | 4.7e-08 | 32.2 | 2.3e-05 | 0.034 | 12.8 |
pfu_aug2.0_925.1_17942.t1 | 9 | 8 | WD40 | 1220 | 1245 | 2.4e-31 | 106.4 | 0.55 | 820.0 | 0.1 |
pfu_aug2.0_925.1_17942.t1 | 9 | 9 | WD40 | 1265 | 1302 | 2.4e-31 | 106.4 | 1.4e-07 | 0.00021 | 21.0 |
pfu_aug2.0_925.1_17942.t1 | 3 | 3 | EF-hand_6 | 1386 | 1393 | 6.6e-07 | 28.6 | 9.1 | 14000.0 | -3.5 |
pfu_aug2.0_925.1_17942.t1 | 3 | 3 | EF-hand_1 | 1387 | 1393 | 4.7e-09 | 34.9 | 3.5 | 5200.0 | -2.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_925.1_17942.t1 | gi|390340083|ref|XP_003725163.1| | PREDICTED: WD repeat-containing protein on Y chromosome [Strongylocentrotus purpuratus] | 0.0 |
pfu_aug2.0_925.1_17942.t1 | gi|390354187|ref|XP_003728270.1| | 0.0 | |
pfu_aug2.0_925.1_17942.t1 | gi|524912554|ref|XP_005111123.1| | PREDICTED: uncharacterized protein LOC101845966 [Aplysia californica] | 0.0 |
pfu_aug2.0_925.1_17942.t1 | gi|573895405|ref|XP_006635450.1| | PREDICTED: WD repeat-containing protein 49-like [Lepisosteus oculatus] | 0.0 |
pfu_aug2.0_925.1_17942.t1 | gi|512880333|ref|XP_002937050.2| | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_925.1_17942.t1 |
---|---|
Definition | - |
>pfu_aug2.0_925.1_17942.t1 atggctaacgacacaaatgcagtaaaacttgaaacttctctgccgatatacagaggattagcgtctcagccgacggcgga gggcgagaggagatcctcttttccattcctacctacctttgatcaccaggaggaggaagtcgagggcagggggctgaaat ctgcccccgaatttgtcaggtcaagtgacgaatcttcgatagatggcgttgaatctgaggacaatacttctgaagatgac cttgagaataattcagtgaggtcaaggtcgtttgcaatatacagaaagatcaagaaagaatttgagcggcgaaggagatc ttttcgagatggtgattctgatgacgaaggaaactttggtgacaaagataaaacccttcgtctcgaggagcagatcaagc ttgaccatctaaaacagctgatggacgagttcctgaaccataagcccccggacatcgtcaaacaggcggggtcagcctac ttccctgccaagacagagaaacgcacccccggggccatgaacatggaggagttcaaatcaacggtggccaaagttctcaa gacagaggagtatgatgaatatttagaaaagttgttcaacaagttggacacttctctggatggatatgtggattggaatg aattttgtacctatatgttattactgtacagagaaaatgactacatgaggaccaaaagggaaatccccttcttgtctgaa ccaaaaataagacatattgaccatacaaagcaagaacaaacaacgaaaatagttgccaccgcaaatccactacgctatgt cacagttagtaaggagggtgtaatcaatgtatggttacctagtttgaactacatagagaagtattacgttgtttctgacg aggattcggatcaaaccggtcagaagagacggtttaagatgtgggtgacggacgccatctttctacctaactgtaacaaa ctcgttataggatcaactagtcgtgatatccgattctacgattgctcaacagccaattactttgaagagtttcagctttt tgctatgtctgacgtcccatactgttttgactattggtatgatgtcaagaatcccagcagaccctctaagctgttctttg gtgtagatacaggatacatccatacattacacttcaagaaaccagtgtctcaactgtttgaaaccccattcaaaaatgaa gaaggagttcaaaaaatattttggacatggcagattcaggggggtgcggagggggcgtcngaatgtcaatattgcttcgg tgacaaggataaaacccttcgtctcgaggagcagatcaagcttgaccacctgaaacaactcatggatgaattcctgaacc ataaacccccggacatcgtcaaacaggcggggtcagcctacttccccgccaagacagagaaacgcaccccaggggccatg aacatggaggagttcaaatcaacggtggccaaagttctcaagacagaggaatatgatgaatatttagaaaagcttttcaa caagttggacacttctttggatgggtacgtggactggaacgagttttgtacttatatgttattgctgtatagagagaacg actacatgaggaccaaaagggaaatccccttcttgtctgaaccaaaaataagacatatagaccatacaaagcaagaacaa acaacgaaaattgtagccactgcaaatccactacgttatgtcacagttagtaaggaaggtgttatcaatgtatggttacc tagtttgaattacatagagaagtattacgtcgtttctgacgaggattcggatcaaaccggccagaagagacggtttaaga tgtgggtgacggacgccatctttctacctaactgtaacaaactcgttataggatcaactagtcgagatatccgattctac gattgctcaacagcaaactactttgaagagtttcagttgtttgctatgtctgacgtcccatactgttttgactactggta tgatgttaagaatcccagcagaccctctaagctgttctttggtgtagatacaggatacatccatacattacacttcaaga aaccagtttctcaactatttgaaactccgttcaaaaatgaggaaggagtgcaaaaaatattttggacagacatagagaaa gggaatcatgagagctacgtcacccatgaaaaaatcctacacggagaaatgtcgttttcctcgttaccagacatagtaaa gcaagtcatgtatctacctgagaacgagtacattatatcgtcaactagcagccccaaacaatcactagtcatctcccctt gtgataagaaggacttcaagaagtcttatatatttgatatagaaaagggtatagagtcgttcgactacaacaagaattta aacattttggtgaccggtagcttagaccacctagtcaggatctggaacccttacgtcactaataaagccatggcaatttt ggaggggcacgccacgggggtaataggggtcattatacatgaggggctcatacaggtgttcagctactctaaagatgctg ttgtcaaagtatgggacattaaggagcacacctgtctacaaacaatcgtattaaagtttccgagcagtattcacggcaga atgccggagcatggtcagtttccgatgcatctccaaccctctccccacgatactcttctagtcacttgtaacgatcatgt tggcatgctcaaactaggtcatacgtcacaaccaaagatgctggaggccgtaacgcacgatactcaactttgtagtgcca tctacaacaaattatttaatcaaattgtaacaggatgtgattcgtctaacgtagcagtatgggagctggagagtggtaat aaatctattgtcttctctaacactcacggagacgaggaaatcacgtgtatggcgtttgatcagacgtataggaggttgtt tactggtgcacggaatggaacaataaaggtatggaatttccaaaatggacataatctacataagttagagccggtatcgg aagcagaaattacaggaatattgccgtactttgatcgtaagatgattctggcggtcggatggggcagaaaactcatcaga tacgatgactctgatcctgataacatgtacatacctgcacagttagattggaaaggaggccaaatccatcaggatgacat cctggccatggattttgctctgccgaactatcttgccacggctgggtttgatggggagatagtggtctgggatatagaga cggagaaaatctttatcagactacgcaaaggacaacaggctgatatttctaagaagatagaggagattcaagcccaaaca agttttattagtgtacagagtacagaatccatacacaaagttaacggagatagtaagccagtcacaccctctaggttatc tagaccaaactctcgtcatcgaaaatctcataaaattccaaaaggtcagcctgctccagtagagaagttattatttttac ctaaacgtctttcatctcgtatttctgacggtgcaatgttaatctccagtgaagcaggataccttaaatggtggtgtctg tttggtgctaagaaagaagttggttacttttatgtaccagataccaaggatgagtcagtactgggtctatgttcagattc tgagaaccaggaactttatacaggggatacccaggggcagatccaggtgtgggatatatcaaattactgtatgtgtgctg aagaaaggcgcatcaagacaaagccacctctaataagaacgtggaaagctcacgattccagcatcgtcagtctggagtat atagaacatgagacagggaattatatcgtgagtgcgtccacagattttacggccaggctatggtcagtggagggtgaata cgtgggaacttttggtcagaaaaagtcttggaatctgaagcagaagtcaacatggatgcatccaaggactccctggtcaa ctaaatctgttatatcaacagatgacagtaaaaatgaaagaaaagacagtagagcagattctgcatctggtttcaaaacg cctggagctgataaagatgatgttaccatggcaacaaaagacagtgaccaatcaaatggtgtgataacaaatggaaaatt agacaaagacaaaactgggtcatcaaagcatgggacagaaagcaggatcagtaaggatgggacaaaagaagagattacag tcagagaaagttctcgcttagagaaatctgaaaaatcattcgtttcaaaagaagaggactccaagattggggagacaggt gctggtaaccatggtgatgggttagagggtatagatcctgacctacttcttaaatgtaggtcacagacatttgccttagg ctcactggaaaggtccaagacatttttaggctctaaggtagcagaacagctgcgaaccattaaagaatcgagaatagaga gacgtcacagactgagtcaagacgtcaactttaaagatacacaaagatttggtaaaatctgctcaccataccaagctctg aagacgaaggatgttgaagagatcaaactcccgtcaaagatgcccctcagccagagaatgattaacaagggttacacatc agataatatgacgcaggaaaaattacttagtatggacttctcttacgttagctccgattctccgctaccaaacgatcaaa ccagcaaggatcgtgaaaaagtgacagaaaaagtcaggactgctggcacacacaggcgtgctaatagtagacagaattta gtgaaaaagagcaacactgtagcatga |
Protein
Protein ID | pfu_aug2.0_925.1_17942.t1 |
---|---|
Definition | - |
>pfu_aug2.0_925.1_17942.t1 MANDTNAVKLETSLPIYRGLASQPTAEGERRSSFPFLPTFDHQEEEVEGRGLKSAPEFVRSSDESSIDGVESEDNTSEDD LENNSVRSRSFAIYRKIKKEFERRRRSFRDGDSDDEGNFGDKDKTLRLEEQIKLDHLKQLMDEFLNHKPPDIVKQAGSAY FPAKTEKRTPGAMNMEEFKSTVAKVLKTEEYDEYLEKLFNKLDTSLDGYVDWNEFCTYMLLLYRENDYMRTKREIPFLSE PKIRHIDHTKQEQTTKIVATANPLRYVTVSKEGVINVWLPSLNYIEKYYVVSDEDSDQTGQKRRFKMWVTDAIFLPNCNK LVIGSTSRDIRFYDCSTANYFEEFQLFAMSDVPYCFDYWYDVKNPSRPSKLFFGVDTGYIHTLHFKKPVSQLFETPFKNE EGVQKIFWTWQIQGGAEGAXECQYCFGDKDKTLRLEEQIKLDHLKQLMDEFLNHKPPDIVKQAGSAYFPAKTEKRTPGAM NMEEFKSTVAKVLKTEEYDEYLEKLFNKLDTSLDGYVDWNEFCTYMLLLYRENDYMRTKREIPFLSEPKIRHIDHTKQEQ TTKIVATANPLRYVTVSKEGVINVWLPSLNYIEKYYVVSDEDSDQTGQKRRFKMWVTDAIFLPNCNKLVIGSTSRDIRFY DCSTANYFEEFQLFAMSDVPYCFDYWYDVKNPSRPSKLFFGVDTGYIHTLHFKKPVSQLFETPFKNEEGVQKIFWTDIEK GNHESYVTHEKILHGEMSFSSLPDIVKQVMYLPENEYIISSTSSPKQSLVISPCDKKDFKKSYIFDIEKGIESFDYNKNL NILVTGSLDHLVRIWNPYVTNKAMAILEGHATGVIGVIIHEGLIQVFSYSKDAVVKVWDIKEHTCLQTIVLKFPSSIHGR MPEHGQFPMHLQPSPHDTLLVTCNDHVGMLKLGHTSQPKMLEAVTHDTQLCSAIYNKLFNQIVTGCDSSNVAVWELESGN KSIVFSNTHGDEEITCMAFDQTYRRLFTGARNGTIKVWNFQNGHNLHKLEPVSEAEITGILPYFDRKMILAVGWGRKLIR YDDSDPDNMYIPAQLDWKGGQIHQDDILAMDFALPNYLATAGFDGEIVVWDIETEKIFIRLRKGQQADISKKIEEIQAQT SFISVQSTESIHKVNGDSKPVTPSRLSRPNSRHRKSHKIPKGQPAPVEKLLFLPKRLSSRISDGAMLISSEAGYLKWWCL FGAKKEVGYFYVPDTKDESVLGLCSDSENQELYTGDTQGQIQVWDISNYCMCAEERRIKTKPPLIRTWKAHDSSIVSLEY IEHETGNYIVSASTDFTARLWSVEGEYVGTFGQKKSWNLKQKSTWMHPRTPWSTKSVISTDDSKNERKDSRADSASGFKT PGADKDDVTMATKDSDQSNGVITNGKLDKDKTGSSKHGTESRISKDGTKEEITVRESSRLEKSEKSFVSKEEDSKIGETG AGNHGDGLEGIDPDLLLKCRSQTFALGSLERSKTFLGSKVAEQLRTIKESRIERRHRLSQDVNFKDTQRFGKICSPYQAL KTKDVEEIKLPSKMPLSQRMINKGYTSDNMTQEKLLSMDFSYVSSDSPLPNDQTSKDREKVTEKVRTAGTHRRANSRQNL VKKSNTVA |