Gene
| Gene Model ID | pfu_aug2.0_925.1_17944 |
|---|---|
| Locus | scaffold925.1 : 194265 ... 200029 : + |
| To GenomeBrowser | scaffold925.1:194265..200029 |
| Genes list of scaffold | scaffold925.1 |
| Synonym | pfu_aug1.0_19778.1_69296 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_925.1_17944.t1 | 1 | 1 | adh_short | 8 | 162 | 2.1e-22 | 79.7 | 2.1e-24 | 3.9e-21 | 75.6 |
| pfu_aug2.0_925.1_17944.t1 | 1 | 1 | KR | 9 | 111 | 1.3e-08 | 34.7 | 1.2e-11 | 2.3e-08 | 33.9 |
| pfu_aug2.0_925.1_17944.t1 | 1 | 1 | NAD_binding_10 | 10 | 217 | 2.7e-08 | 34.0 | 5.2e-11 | 9.7e-08 | 32.2 |
| pfu_aug2.0_925.1_17944.t1 | 2 | 1 | adh_short_C2 | 16 | 107 | 7.1e-11 | 42.3 | 3.4e-12 | 6.2e-09 | 35.9 |
| pfu_aug2.0_925.1_17944.t1 | 2 | 2 | adh_short_C2 | 132 | 215 | 7.1e-11 | 42.3 | 0.014 | 27.0 | 4.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_925.1_17944.t1 | gi|676480514|ref|XP_009062084.1| | hypothetical protein LOTGIDRAFT_205793 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_925.1_17944.t1 | gi|657806847|ref|XP_008330614.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 isoform X1 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_925.1_17944.t1 | gi|734620274|ref|XP_010737978.1| | PREDICTED: dehydrogenase/reductase SDR family member 11-like isoform X1 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_925.1_17944.t1 | gi|551519065|ref|XP_005811028.1| | PREDICTED: dehydrogenase/reductase SDR family member 11-like isoform X2 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_925.1_17944.t1 | gi|348537439|ref|XP_003456202.1| | PREDICTED: dehydrogenase/reductase SDR family member 11-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_925.1_17944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17944.t1 atggaaaggtgggtagggcgggtggcgctcgttacgggagcatccgttgggataggagcagctatttccaggaaattagt gcaaaatggcatgacagtagttgggtgtgcacgtaacgtagaacaaatacaggaaatagccaatgatctcaaatctgaaa aaggaaaattaattcctatgcgatgtgatcttactcgcgaagaagacatattagacgtgtttggaagggtgaagaaggag ttaggcggtgtggatgtaatggttaacaacgccggactatcccacaacgcacctcttctgactggcagtacacaggattg gagaaatatgttggaggaagatggaaaattgtgtgacctatctgataatagcaaaaagtcaaaaagcatgtcaggacacc gagtgatcccaaacagtccgggtcacttctactcagccacaaaacacgccgtcaagggactgacggacggactccgtaat gaactacgagagataaagtctcatattagagtaacagcattgtgtccaggacttgttcacacagagtttcagaaaagaat gtatcaaagcgaggaaatgggtaacaagatttgctccatgtttaagtgtcttgaggcggatgacgtagccgatgccttag tctatgcattaggagcacctccacatgttcagattcacgacatcttattccgacccacagaacaaatatcatga |
|
Protein
| Protein ID | pfu_aug2.0_925.1_17944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17944.t1 MERWVGRVALVTGASVGIGAAISRKLVQNGMTVVGCARNVEQIQEIANDLKSEKGKLIPMRCDLTREEDILDVFGRVKKE LGGVDVMVNNAGLSHNAPLLTGSTQDWRNMLEEDGKLCDLSDNSKKSKSMSGHRVIPNSPGHFYSATKHAVKGLTDGLRN ELREIKSHIRVTALCPGLVHTEFQKRMYQSEEMGNKICSMFKCLEADDVADALVYALGAPPHVQIHDILFRPTEQIS |
|