Gene
| Gene Model ID | pfu_aug2.0_925.1_17945 |
|---|---|
| Locus | scaffold925.1 : 206095 ... 213878 : + |
| To GenomeBrowser | scaffold925.1:206095..213878 |
| Genes list of scaffold | scaffold925.1 |
| Synonym | pfu_aug1.0_19778.1_69297 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dehydrogenase reductase sdr family member 11-like | GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_925.1_17945.t1 | 1 | 1 | adh_short | 8 | 112 | 1.4e-18 | 67.4 | 1.1e-21 | 1.8e-18 | 66.9 |
| pfu_aug2.0_925.1_17945.t1 | 1 | 1 | KR | 9 | 111 | 6.9e-11 | 42.1 | 6.0e-14 | 9.9e-11 | 41.6 |
| pfu_aug2.0_925.1_17945.t1 | 1 | 1 | adh_short_C2 | 15 | 100 | 6.3e-08 | 32.6 | 5.0e-11 | 8.3e-08 | 32.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_925.1_17945.t1 | gi|742239108|ref|XP_010903438.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Esox lucius] | 5.0e-40 |
| pfu_aug2.0_925.1_17945.t1 | gi|115313224|gb|AAI24219.1| | Dehydrogenase/reductase (SDR family) member 11a [Danio rerio] | 2.0e-38 |
| pfu_aug2.0_925.1_17945.t1 | gi|153791596|ref|NP_001093518.1| | dehydrogenase/reductase SDR family member 11 [Danio rerio] | 2.0e-38 |
| pfu_aug2.0_925.1_17945.t1 | gi|499011501|ref|XP_004557490.1| | PREDICTED: dehydrogenase/reductase SDR family member 11 [Maylandia zebra] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_925.1_17945.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17945.t1 atggagaagtgggtaggacgggtggcgcttgtcacaggggcatccgctggtataggggctgccatttctaggaaattagt tcaacatggtatgatcgtcattggctgcgcaccaaatgtagaaaaaatagaggaaatagccaacgatcttgaatccgaaa agggaagactggtaactgtaaaatgtgatgtagcatgtgaagaagaggttttgagtatgtttaagaaagccaaggaggaa tttggtggcgttgacgtaatgatcaacaacgcaggcttgtcgcattattcacctcttctgtctggtaggacggaggattg gaagcacatgcttgagtgccttgagggtgatgacgtagctgacgccttggtctatgcattaggagcacctccacatgttc agattcacgacattctattccgacctacagagcaagtagcatga |
|
Protein
| Protein ID | pfu_aug2.0_925.1_17945.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_925.1_17945.t1 MEKWVGRVALVTGASAGIGAAISRKLVQHGMIVIGCAPNVEKIEEIANDLESEKGRLVTVKCDVACEEEVLSMFKKAKEE FGGVDVMINNAGLSHYSPLLSGRTEDWKHMLECLEGDDVADALVYALGAPPHVQIHDILFRPTEQVA |
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