Gene
| Gene Model ID | pfu_aug2.0_93.1_10262 |
|---|---|
| Locus | scaffold93.1 : 466579 ... 480770 : - |
| To GenomeBrowser | scaffold93.1:466579..480770 |
| Genes list of scaffold | scaffold93.1 |
| Synonym | pfu_aug1.0_4446.1_52276 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coatomer subunit zeta-1 | GO:0015031 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_93.1_10262.t1 | 1 | 1 | Clat_adaptor_s | 12 | 151 | 1.6e-34 | 118.6 | 2.5e-38 | 1.8e-34 | 118.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_93.1_10262.t1 | gi|676432059|ref|XP_009046451.1| | hypothetical protein LOTGIDRAFT_156936 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_93.1_10262.t1 | gi|524914523|ref|XP_005112076.1| | PREDICTED: coatomer subunit zeta-1-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_93.1_10262.t1 | gi|749793041|ref|XP_011149796.1| | PREDICTED: coatomer subunit zeta-1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_93.1_10262.t1 | gi|270009732|gb|EFA06180.1| | hypothetical protein TcasGA2_TC009027 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_93.1_10262.t1 | gi|752899225|ref|XP_011267995.1| | PREDICTED: coatomer subunit zeta-1 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_93.1_10262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_93.1_10262.t1 atggatggtggaattttggaaccatccctgtacacagttaaagccattgccatattagataacgatggaaacagactaat tacaaagtattatgatgagcagtttccctcagcaaaggagcagaaacagtttgaaaagaatctattcaacaaaacacaca gagctaattctgaaatcattatgtttgagggattaacgtgtgtctacaaaagtaacgtggaccttttcttttatgttata ggaagctcacaagaaaatgaacttattttagccagtgttttaaatgccttgtacgactctgtgagtcagatattgaggaa gaatgtagaaaaacgagcattactggagaatcttgatgcagtgttcctagccgtagatgaaatatgtgacggggggatta tattagattcagattcatcaagtatcgtacagaaagtggcggtacggaatgacgacatacctttgggagaacagactgta gcacaggtttttcgggtgttattgcagtcctaa |
|
Protein
| Protein ID | pfu_aug2.0_93.1_10262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_93.1_10262.t1 MDGGILEPSLYTVKAIAILDNDGNRLITKYYDEQFPSAKEQKQFEKNLFNKTHRANSEIIMFEGLTCVYKSNVDLFFYVI GSSQENELILASVLNALYDSVSQILRKNVEKRALLENLDAVFLAVDEICDGGIILDSDSSSIVQKVAVRNDDIPLGEQTV AQVFRVLLQS |
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