Gene
| Gene Model ID | pfu_aug2.0_9306.1_22910 |
|---|---|
| Locus | scaffold9306.1 : 1 ... 7739 : - |
| To GenomeBrowser | scaffold9306.1:1..7739 |
| Genes list of scaffold | scaffold9306.1 |
| Synonym | pfu_aug1.0_14822.1_61409 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable proline--trna mitochondrial-like | GO:0016874 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9306.1_22910.t1 | 1 | 1 | Zn-ribbon_8 | 27 | 62 | 6.8e-06 | 25.9 | 1.7e-08 | 1.1e-05 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9306.1_22910.t1 | gi|498967170|ref|XP_004525996.1| | PREDICTED: probable proline--tRNA ligase, mitochondrial [Ceratitis capitata] | 9.0e-19 |
| pfu_aug2.0_9306.1_22910.t1 | gi|573894648|ref|XP_006635073.1| | PREDICTED: probable proline--tRNA ligase, mitochondrial-like [Lepisosteus oculatus] | 1.0e-18 |
| pfu_aug2.0_9306.1_22910.t1 | gi|395530575|ref|XP_003767366.1| | PREDICTED: probable proline--tRNA ligase, mitochondrial [Sarcophilus harrisii] | 2.0e-18 |
| pfu_aug2.0_9306.1_22910.t1 | gi|751462739|ref|XP_011186235.1| | PREDICTED: probable proline--tRNA ligase, mitochondrial [Bactrocera cucurbitae] | 2.0e-18 |
| pfu_aug2.0_9306.1_22910.t1 | gi|45387545|ref|NP_991118.1| | probable proline--tRNA ligase, mitochondrial [Danio rerio] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_9306.1_22910.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9306.1_22910.t1 ctgaagccgctgttggtaatataggaggatccctctcacatgagtttcacttagaatctgaagttggtgaggacagagtc tataaatgtttacagtgtgggcacatagctaatgcagaagtaacaggtatgaatgacgagaagaagccattttgttcaaa atgtgggagtaacaaactacagcaactatcatgtatagaggttggtcattcttttctcctgggtacaaaatactccgagg tgtttaaggctgcttacaatcaggagggtgtaggtaagag |
|
Protein
| Protein ID | pfu_aug2.0_9306.1_22910.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9306.1_22910.t1 EAAVGNIGGSLSHEFHLESEVGEDRVYKCLQCGHIANAEVTGMNDEKKPFCSKCGSNKLQQLSCIEVGHSFLLGTKYSEV FKAAYNQEGVGK |
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