Gene
| Gene Model ID | pfu_aug2.0_932.1_08020 |
|---|---|
| Locus | scaffold932.1 : 69001 ... 92255 : - |
| To GenomeBrowser | scaffold932.1:69001..92255 |
| Genes list of scaffold | scaffold932.1 |
| Synonym | pfu_aug1.0_14537.1_03513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_932.1_08020.t1 | 2 | 1 | Lectin_C | 6 | 20 | 1.6e-12 | 47.9 | 0.24 | 3500.0 | -1.4 |
| pfu_aug2.0_932.1_08020.t1 | 2 | 2 | Lectin_C | 151 | 251 | 1.6e-12 | 47.9 | 3.3e-16 | 4.9e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_932.1_08020.t1 | gi|524884542|ref|XP_005098890.1| | PREDICTED: perlucin-like [Aplysia californica] | 2.0e-14 |
| pfu_aug2.0_932.1_08020.t1 | gi|640831610|ref|XP_008071404.1| | PREDICTED: collectin-10 [Tarsius syrichta] | 6.0e-13 |
| pfu_aug2.0_932.1_08020.t1 | gi|260793340|ref|XP_002591670.1| | hypothetical protein BRAFLDRAFT_223334 [Branchiostoma floridae] | 2.0e-12 |
| pfu_aug2.0_932.1_08020.t1 | gi|657584567|ref|XP_008296438.1| | PREDICTED: galactose-specific lectin nattectin-like [Stegastes partitus] | 5.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_932.1_08020.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_932.1_08020.t1 atggttgttccagtgagccagaatgaaaacaactacataaagcaaattgcgagagattcaggagagaaagatcctgattg taaagagtctctgactgatggactttctgaactcgaatactaccttaagacttcagtaacacagaagctattgcagttag aaaacaggcttcaggatattatttacaaaacaaatatgcaacagaacaatggtgacgaagccttagaggttatcggtcga aggtctaaaaaaagattatctcctaaatgtcttgacaatgatgaaagaaacaatgttcgaaaaaagactctaattccacg aagaaatgccgagaccagtggacacagtttcgtgaaagatgatatttctagagtggaagaatccatttatcattctggga cgccttgatacatagatgacgagttgtccataaagaatccgaactttaagagtttttgtcgatccctaggcgccagtttg actgttccagaggatgcggatgaaaatgaattcttaaagcaaatgggacgagatgcaggagactatgttatatggtttgg aatatctgatatttataaagaaggccagtggctagcataccccgacatgattccaattactcaaaacttaacagattggg gtactggtgaaccatctggtggccatgagcattgtggggacctttttggtggatatgactatcgatggaatgacagtccg tgtgatcagcaacgtcctttcatttgtgaaaagaaaatatga |
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Protein
| Protein ID | pfu_aug2.0_932.1_08020.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_932.1_08020.t1 MVVPVSQNENNYIKQIARDSGEKDPDCKESLTDGLSELEYYLKTSVTQKLLQLENRLQDIIYKTNMQQNNGDEALEVIGR RSKKRLSPKCLDNDERNNVRKKTLIPRRNAETSGHSFVKDDISRVEESIYHSGTPXYIDDELSIKNPNFKSFCRSLGASL TVPEDADENEFLKQMGRDAGDYVIWFGISDIYKEGQWLAYPDMIPITQNLTDWGTGEPSGGHEHCGDLFGGYDYRWNDSP CDQQRPFICEKKI |
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