Gene
| Gene Model ID | pfu_aug2.0_932.1_08021 |
|---|---|
| Locus | scaffold932.1 : 98816 ... 125425 : - |
| To GenomeBrowser | scaffold932.1:98816..125425 |
| Genes list of scaffold | scaffold932.1 |
| Synonym | pfu_aug1.0_2310.1_66271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_932.1_08021.t1 | 2 | 1 | Lectin_C | 1076 | 1102 | 4.8e-17 | 62.5 | 3.3 | 12000.0 | -3.1 |
| pfu_aug2.0_932.1_08021.t1 | 2 | 2 | Lectin_C | 1151 | 1257 | 4.8e-17 | 62.5 | 1.8e-20 | 6.5e-17 | 62.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_932.1_08021.t1 | gi|731269361|ref|XP_010603920.1| | PREDICTED: CD209 antigen isoform X1 [Fukomys damarensis] | 1.0e-14 |
| pfu_aug2.0_932.1_08021.t1 | gi|731269365|ref|XP_010603922.1| | PREDICTED: CD209 antigen isoform X3 [Fukomys damarensis] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_932.1_08021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_932.1_08021.t1 atgaaaatggtcagagatgtaaacatttgttctccgtgcaaatgcgacagattctgtattaacaggggagattgttgtgc agacatttatttcgccaaacccgttttacaatgtgtcaacagaacgattatacaggcaagagaggacactgatcgcgtgc aacagaatcagcgtctaatggtcgccagctgtccaaaaggcgtcccggaaaacgtcagaaaatcttgcgaaaactctgac gtaaagtggaaattacgccatcagcctgtcgttcactatgaccaactgatcgtttataaaaacaagttttgtgcaaattg caataatgttactctttacagggaatgggcgatcgatatcaattgcagcaagtttgccgatttcaacttcctgtcgtcat taaatgacgtcatttcattagcctttgagaggaaatgcgtcatccaatcaactgacgacaacatttttgggactctcgga ccagcagtgtcattccaatacaatgttgaaaattgtatttcaaaaccttatcaatacgcaaagtgcaacgtcactggaat gtgggtaaattatgacaaggatatagaatacgcctgcgagtctcctttcttaggagaaaagaggatgtttagaaatatat tctgttttatgtgcaatccgtcaccgggaaaacacgacaagtttatagattcctgtaacgtaacgggatcttggaatccg ttcgatgacggactcttgatattatgtcataaccttccacgttcaccgtatacggcaccatttaagaatgtgtattgttt tctgtgtaacagagacaactcggaaaataaaacgttcctggacgtaaatggtgatatggaagagtttactgtgcattctg gacccataataaaataccagtatgacgtcaacatgacatcattcgacaaacgctactttcgtaatttcgtaagggaaaaa atggctatgaatccatctttggaagacgtgataaagacgaaggacgcactgggcatcatttctactgtaggtcactctat caatatcaccaacttgtttaaccaatatgtttcaacattcgcttacgctgacttatgtccaagtaggcagtattcggtga attcacaatttctgaacatttgtacgtgtaacccatttttggtgtttgaagagagtgctttcaaaacgaggacgccttgt cttgatgctagactggattatcccacgtcttgccggagagaacttgaattgtctgggatacccgacactcgtattatgaa ggaaaattacttggtcacaaaaggatgttttcaagcaagaagtaaacgtgcatacgccgatggatgcttacgtcatgata ttgatgacgttttttctgtcctgccattatctagaaatgtcacttggaataattcagacgtcttagtcacttttgacaat ttctattgtgctttatgcaatatacacagcacagaatatgcaatggagatgaatttggaacttgatataagtttacagtt acaaagagggttatattctcccacgatcgaggaagaccttaacgatcttagaatcaacacatcagttccttggagcttgg aaattgtttgtcccgccatcttaccaacgagttataatgtacttcttggggatctgttaaagattgcgcatgctcagaaa tgtagaattcgttatgtaacggatgttcaaaagtcaccgctctgtaaagatattagtgaccaagtcgatcattgtgacaa gatatctaattggacgtttcctgatgatgacgtaaaatgggcgtgtttaaataagtcttctttggatctatattacgcgc gaaggatatcctcacccaacccggaagtatttgatccagatgactatacaaactatagaataggtatatatcggaataga ttttgctctatttgcaaaccccaacataatttcggcaatttttcctttttcttagaaagctgtaatgttaccgggcttct tgcattttcacgtatgcctctaaccgatgacatatttggacgttatgaaaagggatgccaaatggcagtccgaacgtatt actactatccatacaagaatatattttgcgcgttctgtgatggtacgacatacacctcgagtgcaacccaaggagtagac tccaagattgtcaaatatcaaagagtacctggattgaattggttccccatcattagaaatatattttctattgccgatcc atacggcgtcgattacgtcatcactaaagagaaatgtgagatcaaccaagtttacgacgcatttgagaacaagtgtatga acatcagctgctttccaggaaaagtttcgaagaatgcgtcatgtgtgccactattctctacaacaaagatgctacgttat actctagcattaggaggagattttcagtttcccaatagaaccacggaggatgctatgatggttttgattctcgagttaga tcaattcatcagaaacagtctaggtattagaagcctccatatagaacacgtatatgctcacttaaaccaaccatgtgata agaagtattcagataaatctattgcaagtgttcgaatgtaccttgtcgtattcatctcagaaactgtttcccgacaagta acagaagaaagattgctagatatcacagaagcaaaagtgtcgtccgcgaatttaacagcccaattccgacctatgaagga agcaagcaggctccctctacttctacataccaaaagacgaaaaaatgagtgtttcgtgtacatgaatccttcaacagcct tcacgatgaaaccctacagaccggttcctgtatcggaactactactttgtccttacgtggtactatccgctggtgaatac atttatcactcagaaacacattctttgaaactgaagaggagtggtaagatattgcatgaaagttcttacgaactacaggg aaataacgatattatcatatgcaaggaagaactggaaaggacagggtactttctggaatcaacacaggatttctcagact taaaatcattgtggatcatatcagttatatgttcagttgtttcctgtatttgtttactcattgctatagtaacatattgc atttttccatcattgcgaacagttccaggtttcattgcaatatttaccgcgcttcaaaatgtccttggacaaactttgtt tttagataaaagagagaaaaattctatatgtacagagtctaagaataatcaccttgctgaagtggaagcctatctaaaga cttcagtagctatgaagctactgcaaatggaaaacaaactcgacgatatcattgacaataaaatgtctccaccagagaat caaaatgaaaaagtatccaatacaacggaggactgccaagatcgatggacaaagtttcgtgacagttgctactttcacag caaaggaataaagttggcatggtgggatgcgttgacattctgtcaatccgtcggagcaacatttgctgcgccaacggatg gtgatgaaaatgatttcttgaagcaaagtgcaagagaatcaggagaacttgtagtttggataggtatatcggatgcttac attcgcggacaatggctgtcataccctgacatgactccaattaacattacagactggggcccaaccgaaccaaattatga cgcagaaaattgtgtagaaatgtatagaaaatatgactatcgctggaacgacagttcgtgttcgaatcaacggcctttca tttgtgaaaaacctgcatga |
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Protein
| Protein ID | pfu_aug2.0_932.1_08021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_932.1_08021.t1 MKMVRDVNICSPCKCDRFCINRGDCCADIYFAKPVLQCVNRTIIQAREDTDRVQQNQRLMVASCPKGVPENVRKSCENSD VKWKLRHQPVVHYDQLIVYKNKFCANCNNVTLYREWAIDINCSKFADFNFLSSLNDVISLAFERKCVIQSTDDNIFGTLG PAVSFQYNVENCISKPYQYAKCNVTGMWVNYDKDIEYACESPFLGEKRMFRNIFCFMCNPSPGKHDKFIDSCNVTGSWNP FDDGLLILCHNLPRSPYTAPFKNVYCFLCNRDNSENKTFLDVNGDMEEFTVHSGPIIKYQYDVNMTSFDKRYFRNFVREK MAMNPSLEDVIKTKDALGIISTVGHSINITNLFNQYVSTFAYADLCPSRQYSVNSQFLNICTCNPFLVFEESAFKTRTPC LDARLDYPTSCRRELELSGIPDTRIMKENYLVTKGCFQARSKRAYADGCLRHDIDDVFSVLPLSRNVTWNNSDVLVTFDN FYCALCNIHSTEYAMEMNLELDISLQLQRGLYSPTIEEDLNDLRINTSVPWSLEIVCPAILPTSYNVLLGDLLKIAHAQK CRIRYVTDVQKSPLCKDISDQVDHCDKISNWTFPDDDVKWACLNKSSLDLYYARRISSPNPEVFDPDDYTNYRIGIYRNR FCSICKPQHNFGNFSFFLESCNVTGLLAFSRMPLTDDIFGRYEKGCQMAVRTYYYYPYKNIFCAFCDGTTYTSSATQGVD SKIVKYQRVPGLNWFPIIRNIFSIADPYGVDYVITKEKCEINQVYDAFENKCMNISCFPGKVSKNASCVPLFSTTKMLRY TLALGGDFQFPNRTTEDAMMVLILELDQFIRNSLGIRSLHIEHVYAHLNQPCDKKYSDKSIASVRMYLVVFISETVSRQV TEERLLDITEAKVSSANLTAQFRPMKEASRLPLLLHTKRRKNECFVYMNPSTAFTMKPYRPVPVSELLLCPYVVLSAGEY IYHSETHSLKLKRSGKILHESSYELQGNNDIIICKEELERTGYFLESTQDFSDLKSLWIISVICSVVSCICLLIAIVTYC IFPSLRTVPGFIAIFTALQNVLGQTLFLDKREKNSICTESKNNHLAEVEAYLKTSVAMKLLQMENKLDDIIDNKMSPPEN QNEKVSNTTEDCQDRWTKFRDSCYFHSKGIKLAWWDALTFCQSVGATFAAPTDGDENDFLKQSARESGELVVWIGISDAY IRGQWLSYPDMTPINITDWGPTEPNYDAENCVEMYRKYDYRWNDSSCSNQRPFICEKPA |
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