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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_933.1_11315
Locus scaffold933.1 : 61787 ... 71935 : -
To GenomeBrowser scaffold933.1:61787..71935
Genes list of scaffold scaffold933.1
Synonym pfu_aug1.0_25904.1_55107

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_933.1_11315.t1 1 1 CAP 23 152 7.5e-19 68.4 7.7e-23 1.1e-18 67.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_933.1_11315.t1 gi|676490546|ref|XP_009065305.1| hypothetical protein LOTGIDRAFT_203268 [Lottia gigantea] 6.0e-40
pfu_aug2.0_933.1_11315.t1 gi|676467423|ref|XP_009057883.1| hypothetical protein LOTGIDRAFT_105395, partial [Lottia gigantea] 5.0e-37
pfu_aug2.0_933.1_11315.t1 gi|664757810|ref|XP_008536433.1| PREDICTED: cysteine-rich secretory protein 3 isoform X2 [Equus przewalskii] 3.0e-33

Transcript
Transcript IDpfu_aug2.0_933.1_11315.t1
Definition-
>pfu_aug2.0_933.1_11315.t1
atgcacgcattatcgaatacgaggaaggaaccctttggaatcgcaccatcggtacaagcaagtattcttgatcttcacaa
tgagtttcgaaggaatatttccaaaagacacggtgcaacaaacatgatgaaaatggtgtgggatgaccagctggctgctt
cagcatataattgggctttacactatgaattccaacataaccactttgcagacagatacatacaaggttttcctggtttg
cctaccggacagaacatgtgtatgaacctaccggactggccaagctgtgtacagaaatggttcgatgaagagagcgactt
cagatatggcgcaggatttaatgagctcaactatggctccgttggacattttgtccagattgcctattggaaatcagcaa
gagtaggatgtggctacgcaacatgcggctgttacaagtatttcgtttgcgagtacgctgaagcattgcttttcacaccg
tctgtgtactcaccttggagtcaaggagaaccgtgtgcggactgcccagatcgctgtgacgacggactttgcgactgttc
cggtaagttatgcagtaatatgggagagttaaaggtggatacgtgtgactgtgtgtgttatacccaggcatactctggaa
atatgtgtcaaaatttgaactgtggtgtacaggatgatttcatgtgtgctcaaatgaatgtcacattctgcagagatgtt
ccaaatatctattccctttgtcccattatgtgcagcagatgtccagcataa

Protein
Protein IDpfu_aug2.0_933.1_11315.t1
Definition-
>pfu_aug2.0_933.1_11315.t1
MHALSNTRKEPFGIAPSVQASILDLHNEFRRNISKRHGATNMMKMVWDDQLAASAYNWALHYEFQHNHFADRYIQGFPGL
PTGQNMCMNLPDWPSCVQKWFDEESDFRYGAGFNELNYGSVGHFVQIAYWKSARVGCGYATCGCYKYFVCEYAEALLFTP
SVYSPWSQGEPCADCPDRCDDGLCDCSGKLCSNMGELKVDTCDCVCYTQAYSGNMCQNLNCGVQDDFMCAQMNVTFCRDV
PNIYSLCPIMCSRCPA

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