Gene
| Gene Model ID | pfu_aug2.0_933.1_11315 |
|---|---|
| Locus | scaffold933.1 : 61787 ... 71935 : - |
| To GenomeBrowser | scaffold933.1:61787..71935 |
| Genes list of scaffold | scaffold933.1 |
| Synonym | pfu_aug1.0_25904.1_55107 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_933.1_11315.t1 | 1 | 1 | CAP | 23 | 152 | 7.5e-19 | 68.4 | 7.7e-23 | 1.1e-18 | 67.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_933.1_11315.t1 | gi|676490546|ref|XP_009065305.1| | hypothetical protein LOTGIDRAFT_203268 [Lottia gigantea] | 6.0e-40 |
| pfu_aug2.0_933.1_11315.t1 | gi|676467423|ref|XP_009057883.1| | hypothetical protein LOTGIDRAFT_105395, partial [Lottia gigantea] | 5.0e-37 |
| pfu_aug2.0_933.1_11315.t1 | gi|664757810|ref|XP_008536433.1| | PREDICTED: cysteine-rich secretory protein 3 isoform X2 [Equus przewalskii] | 3.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_933.1_11315.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_933.1_11315.t1 atgcacgcattatcgaatacgaggaaggaaccctttggaatcgcaccatcggtacaagcaagtattcttgatcttcacaa tgagtttcgaaggaatatttccaaaagacacggtgcaacaaacatgatgaaaatggtgtgggatgaccagctggctgctt cagcatataattgggctttacactatgaattccaacataaccactttgcagacagatacatacaaggttttcctggtttg cctaccggacagaacatgtgtatgaacctaccggactggccaagctgtgtacagaaatggttcgatgaagagagcgactt cagatatggcgcaggatttaatgagctcaactatggctccgttggacattttgtccagattgcctattggaaatcagcaa gagtaggatgtggctacgcaacatgcggctgttacaagtatttcgtttgcgagtacgctgaagcattgcttttcacaccg tctgtgtactcaccttggagtcaaggagaaccgtgtgcggactgcccagatcgctgtgacgacggactttgcgactgttc cggtaagttatgcagtaatatgggagagttaaaggtggatacgtgtgactgtgtgtgttatacccaggcatactctggaa atatgtgtcaaaatttgaactgtggtgtacaggatgatttcatgtgtgctcaaatgaatgtcacattctgcagagatgtt ccaaatatctattccctttgtcccattatgtgcagcagatgtccagcataa |
|
Protein
| Protein ID | pfu_aug2.0_933.1_11315.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_933.1_11315.t1 MHALSNTRKEPFGIAPSVQASILDLHNEFRRNISKRHGATNMMKMVWDDQLAASAYNWALHYEFQHNHFADRYIQGFPGL PTGQNMCMNLPDWPSCVQKWFDEESDFRYGAGFNELNYGSVGHFVQIAYWKSARVGCGYATCGCYKYFVCEYAEALLFTP SVYSPWSQGEPCADCPDRCDDGLCDCSGKLCSNMGELKVDTCDCVCYTQAYSGNMCQNLNCGVQDDFMCAQMNVTFCRDV PNIYSLCPIMCSRCPA |
|