Gene
| Gene Model ID | pfu_aug2.0_933.1_11317 |
|---|---|
| Locus | scaffold933.1 : 139643 ... 149935 : - |
| To GenomeBrowser | scaffold933.1:139643..149935 |
| Genes list of scaffold | scaffold933.1 |
| Synonym | pfu_aug1.0_1416.1_29716 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_933.1_11317.t1 | 1 | 1 | GCV_T | 54 | 167 | 4.7e-19 | 68.6 | 4.2e-22 | 3.1e-18 | 65.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_933.1_11317.t1 | gi|676460251|ref|XP_009055562.1| | hypothetical protein LOTGIDRAFT_182349 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_933.1_11317.t1 | gi|524868147|ref|XP_005090879.1| | PREDICTED: putative transferase CAF17 homolog, mitochondrial-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_933.1_11317.t1 | gi|260797653|ref|XP_002593816.1| | hypothetical protein BRAFLDRAFT_75724 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_933.1_11317.t1 | gi|410923911|ref|XP_003975425.1| | 0.0 | |
| pfu_aug2.0_933.1_11317.t1 | gi|602643004|ref|XP_007444741.1| | PREDICTED: putative transferase CAF17 homolog, mitochondrial-like [Python bivittatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_933.1_11317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_933.1_11317.t1 atgaaaatcttggtgtcgcaactgaggaaacttgtaccaggagtcagtcgatactgtacattctgccattgtcacagagc tgatcagctgttttctggacagatggacagtgtattacatagacgtacatacagtgtgtgtaagaaatggggcttacatc cactgaaaagccgcggactggttaggctaaaagggaatgatgtggtgcccttcctacaggggctgattaccaatgatgtc acaaagcttggagattcttgcagatctttgtattccatgatgctgaatgtacaaggtcgtgttttgtatgacatgatggt ataccagacgcctggtacagacaatacaccatgtgtacttgtagaggtagacagagaagtggtgacagaattcatcaaaa caatgaagaagtacaagatccgcaaaaaggttgatataactgatgtaacaggagagttacagagctatgctgttacacca caggatagttatgataatatcccatggttaccaatcaaccaggagaatgcgatagcagcagaggcagaccccagacttca aacctttggttggagagttatctcccctgatcaatcctacatcacatcaaacgttgatcctgatgtgactgtgtcattat tagatgaacatgagtaccacatagcacgttatagacttggaattcccgagggtattaaggacttaccgccaggggattgt ctccccctggaaagcaatctagtcttccatgatggagtgagttttacaaaaggttgttacattggtcaggaactgacagc caggactcatcacacaggagttacacgtaaacgactgatgcccattgtattggacagaaatgctgcagatgtgtacggac ttggtttgattcgattggctcatcttaaagataaactagaaatccgagtgaacgaggggaacaaatactgtgtggagaca gcggtaccgtcgtggtggccccaggaagcggaggcatcgagactgtga |
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Protein
| Protein ID | pfu_aug2.0_933.1_11317.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_933.1_11317.t1 MKILVSQLRKLVPGVSRYCTFCHCHRADQLFSGQMDSVLHRRTYSVCKKWGLHPLKSRGLVRLKGNDVVPFLQGLITNDV TKLGDSCRSLYSMMLNVQGRVLYDMMVYQTPGTDNTPCVLVEVDREVVTEFIKTMKKYKIRKKVDITDVTGELQSYAVTP QDSYDNIPWLPINQENAIAAEADPRLQTFGWRVISPDQSYITSNVDPDVTVSLLDEHEYHIARYRLGIPEGIKDLPPGDC LPLESNLVFHDGVSFTKGCYIGQELTARTHHTGVTRKRLMPIVLDRNAADVYGLGLIRLAHLKDKLEIRVNEGNKYCVET AVPSWWPQEAEASRL |
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