Gene
| Gene Model ID | pfu_aug2.0_935.1_17949 |
|---|---|
| Locus | scaffold935.1 : 66069 ... 73835 : - |
| To GenomeBrowser | scaffold935.1:66069..73835 |
| Genes list of scaffold | scaffold935.1 |
| Synonym | pfu_aug1.0_82693.1_13264 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_935.1_17949.t1 | 1 | 1 | DNA_methylase | 6 | 292 | 3.9e-13 | 49.2 | 3.6e-17 | 5.4e-13 | 48.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_935.1_17949.t1 | gi|742214328|ref|XP_010897330.1| | PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Esox lucius] | 8.0e-40 |
| pfu_aug2.0_935.1_17949.t1 | gi|719736714|ref|XP_010226038.1| | PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Tinamus guttatus] | 3.0e-38 |
| pfu_aug2.0_935.1_17949.t1 | gi|585646996|ref|XP_006813977.1| | PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like [Saccoglossus kowalevskii] | 3.0e-38 |
| pfu_aug2.0_935.1_17949.t1 | gi|545489877|ref|XP_005617155.1| | PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform X3 [Canis lupus familiaris] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_935.1_17949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_935.1_17949.t1 atgttgtctcccctacagtttggcatccctaactccagactacgctattatctgatagccaagaaagaacctagtaaatt cccatttacttctactgaggagctcatgacagacattccaccatgtgtcatgaaatggttgaaatacagacacagggcaa aatctctatctactaaaagtttaaatgttgatacaaacacaagtgtagactgttcatctgaactacagaactcaaaaact gatgtcaaatccaaagaggaacgaatccaaaacagtgaatcagataacgatacatcatgttctaaatcagagaataaagc ttctttgtccacaaataaatttacatgtaaaatatgtaagtctgagtgtctacagaactatgcccaaaatatgagacaag aaaacattgacaacaaggaatctgagaatgactgtttacccataatgcatttccttgaagaaaaatcaccgtcagagttt gaatgcttttgcctctctaggaaagatctgaaacgatttatagtcatggatgttgtcctgccctgcatgaaaaagtccac ttgttttacaaagagatatggtcattttatggaaggagcaggttctgtggtacagatgactactaacgtacaggtgatgg agagggcaagtctattaaaggatgaagctttagaactacagaaccgtgatcagtggggtgatagagaatacagcatactg gaagacctcaaactccgatactttactcctaaagaaatagccaatttactttgtttttcagataattacggatttcctaa agacctaggtaatattcagttataccgttgccttggaaacagtctcaatgtccatgtggtgtctgtgcttatcaaactct tgacatttgatgatagcatgtcaaatgttgaatag |
|
Protein
| Protein ID | pfu_aug2.0_935.1_17949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_935.1_17949.t1 MLSPLQFGIPNSRLRYYLIAKKEPSKFPFTSTEELMTDIPPCVMKWLKYRHRAKSLSTKSLNVDTNTSVDCSSELQNSKT DVKSKEERIQNSESDNDTSCSKSENKASLSTNKFTCKICKSECLQNYAQNMRQENIDNKESENDCLPIMHFLEEKSPSEF ECFCLSRKDLKRFIVMDVVLPCMKKSTCFTKRYGHFMEGAGSVVQMTTNVQVMERASLLKDEALELQNRDQWGDREYSIL EDLKLRYFTPKEIANLLCFSDNYGFPKDLGNIQLYRCLGNSLNVHVVSVLIKLLTFDDSMSNVE |
|