Gene
| Gene Model ID | pfu_aug2.0_935.1_17950 |
|---|---|
| Locus | scaffold935.1 : 73966 ... 80712 : + |
| To GenomeBrowser | scaffold935.1:73966..80712 |
| Genes list of scaffold | scaffold935.1 |
| Synonym | pfu_aug1.0_3068.1_23159 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_935.1_17950.t1 | 4 | 1 | WD40 | 54 | 71 | 2.9e-11 | 42.7 | 0.014 | 210.0 | 2.0 |
| pfu_aug2.0_935.1_17950.t1 | 4 | 2 | WD40 | 99 | 125 | 2.9e-11 | 42.7 | 0.0001 | 1.5 | 8.8 |
| pfu_aug2.0_935.1_17950.t1 | 4 | 3 | WD40 | 201 | 227 | 2.9e-11 | 42.7 | 1.5e-07 | 0.0022 | 17.8 |
| pfu_aug2.0_935.1_17950.t1 | 4 | 4 | WD40 | 256 | 297 | 2.9e-11 | 42.7 | 1.2e-06 | 0.018 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_935.1_17950.t1 | gi|676482392|ref|XP_009062683.1| | hypothetical protein LOTGIDRAFT_235301 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_935.1_17950.t1 | gi|524879263|ref|XP_005096309.1| | PREDICTED: dmX-like protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_935.1_17950.t1 | gi|157113444|ref|XP_001657831.1| | AAEL006472-PA, partial [Aedes aegypti] | 0.0 |
| pfu_aug2.0_935.1_17950.t1 | gi|242016272|ref|XP_002428753.1| | rabconnectin, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_935.1_17950.t1 | gi|170045722|ref|XP_001850447.1| | rabconnectin [Culex quinquefasciatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_935.1_17950.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_935.1_17950.t1 atgacaggttaccgcacctactcctttcacccaaaattccaatcgtgtcaatcaaacaggagattttcagcgagttcccc aacgggatgtgacattgtgatactggccagtgatttccagcgagttcagatcattcctggtgtggctcatggtaatgtca aggtcagctgtgtggactgctctacagatactggaaagatagctgcatcataccaacgcagagtttatatatttgagccc actcctctgttacatcatgagagttctcataagctagattatcgctggtaccaaactgctgtatttgaagctgattgttt tattaattgcttgagctggaatcttgagggttttcgtcttctcactggtggagaagtgattcagatttggacttactcac aagagcaccatgacgatgctggaggaagtaaatcagtgcgtttccaagtgggggaagaagatagtgaaaggaagctgtct gaccaaggtcaaggtcacccattacaaggtcaaggtcactcaatacaaggtcaagataatcaacatttacaagatctgga aacagtatgggattgtatctggagatgcaagccagccacagcagtgtatcacctcaaatactctcctgatggtttactgt ttgcctcagcagggaaggctgaccgtctggtgaagatatggtatgaagacagaaaaattcagcttcccttgaccagaata gacagtgtggcaagccccaagaaggaggaacttcattattcctttgtttatattgcccatcctagagctgttacaggatt ctcatggagaaaaaccagcaagtacatgcctaggggttctgtggctaacatgttgataacatcatgtgtggacaatgttt gtcgactgtggtgtgagaccatactaccagatgacggccttgtagacttggaacagtttgacccgaatgcttcaatggaa ccaaaattccatacacatcgtcataaaaaacgattcattcagaggctgaaaactatcagcatactcactacatatacaat tgaaaactttagagtacaatattga |
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Protein
| Protein ID | pfu_aug2.0_935.1_17950.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_935.1_17950.t1 MTGYRTYSFHPKFQSCQSNRRFSASSPTGCDIVILASDFQRVQIIPGVAHGNVKVSCVDCSTDTGKIAASYQRRVYIFEP TPLLHHESSHKLDYRWYQTAVFEADCFINCLSWNLEGFRLLTGGEVIQIWTYSQEHHDDAGGSKSVRFQVGEEDSERKLS DQGQGHPLQGQGHSIQGQDNQHLQDLETVWDCIWRCKPATAVYHLKYSPDGLLFASAGKADRLVKIWYEDRKIQLPLTRI DSVASPKKEELHYSFVYIAHPRAVTGFSWRKTSKYMPRGSVANMLITSCVDNVCRLWCETILPDDGLVDLEQFDPNASME PKFHTHRHKKRFIQRLKTISILTTYTIENFRVQY |
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