Gene
| Gene Model ID | pfu_aug2.0_94.1_13576 |
|---|---|
| Locus | scaffold94.1 : 110396 ... 117643 : + |
| To GenomeBrowser | scaffold94.1:110396..117643 |
| Genes list of scaffold | scaffold94.1 |
| Synonym | pfu_aug1.0_2085.1_51508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_94.1_13576.t1 | 1 | 1 | GH3 | 18 | 430 | 0.0 | 294.8 | 0.0 | 0.0 | 294.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_94.1_13576.t1 | gi|556987048|ref|XP_005998943.1| | PREDICTED: GH3 domain-containing protein isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_94.1_13576.t1 | gi|524896109|ref|XP_005104532.1| | PREDICTED: GH3 domain-containing protein-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_94.1_13576.t1 | gi|260833554|ref|XP_002611722.1| | hypothetical protein BRAFLDRAFT_63587 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_94.1_13576.t1 | gi|147906344|ref|NP_001082827.1| | GH3 domain-containing protein [Danio rerio] | 0.0 |
| pfu_aug2.0_94.1_13576.t1 | gi|676440791|ref|XP_009049289.1| | hypothetical protein LOTGIDRAFT_206174 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_94.1_13576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13576.t1 atgtgtgcattggataaaagattatttgtaancccggatagtagaaaacttcagaaaagtttaaagttcttttacacccc ccgttggaggacatgtgaagcaggggtacctgtaggtcctaactcatcctcacccaccaatacaaggcaacttctcaatg tttattcaacacccaaagctgggttcgaaatcttgtctgaaccggaagcattatacattcacttactatttggaatgaaa gacaaacacattggtatgctggaggcaaatttctcatcaattattttgtcttcattcaaggcattggatattcactggaa agatataattgaagacattgagaaagggagagtaaatcctaatttgaaaatagatgatgacgtccgtaatgaactagata aagtattgaaacctgatccatctagagctcaggagcttaaggaagcctttgaaggtggacctataggtctggcaaaacgt atctggcccaactgccacttaatgcttgctgcagattcagggtcgtttgaactgccggcaaatattcttcgagagaccta ctgtaagaatcttcctatatactctcccctatatgctgcatccgaaggtttgcttggagtaaacgtttggccattgaagc atcccagtcattatttgctggctcccaagtcaatgttctttgagttcattcccgtagagcattgtaaagaagaccagcct gccactctatttttagatcaggtacaacttggtgaagagtatgagttggtcatatcaacagcaggcggattttggcgtta cagatttggtgacgttgtcagagtgactgggttttacaaccaatgtcctattatagagttcatgtacagacaaggacagt ttttgaatgtcagaggtgaaaaaacatcggaatcatcgttttatcaggcgttgagtaaagcatgcgagtcatggtcggat atcaaacttgtcgattactgctgttgtgagagcatcttaatcgatgatcaaggatcctcgtggaagtcttatgccccgac ctattatgtgttcctggagttggatggctctggaaagctgacagcagaacaaaagaataagatcgatgagattttggctg agcagtcgtatgtttacaagtccttcagaactaaaggaagtatacgtcccatggtggttaaaattgtacgaccaggaacg ttcaaggagctgagagaattcaccatagagactaccactgcatcagcaaaccagtacaagatccccagaacactcaaacg aaaggaggctgtgaactttgtgctagatagagtgattaagggggattga |
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Protein
| Protein ID | pfu_aug2.0_94.1_13576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13576.t1 MCALDKRLFVXPDSRKLQKSLKFFYTPRWRTCEAGVPVGPNSSSPTNTRQLLNVYSTPKAGFEILSEPEALYIHLLFGMK DKHIGMLEANFSSIILSSFKALDIHWKDIIEDIEKGRVNPNLKIDDDVRNELDKVLKPDPSRAQELKEAFEGGPIGLAKR IWPNCHLMLAADSGSFELPANILRETYCKNLPIYSPLYAASEGLLGVNVWPLKHPSHYLLAPKSMFFEFIPVEHCKEDQP ATLFLDQVQLGEEYELVISTAGGFWRYRFGDVVRVTGFYNQCPIIEFMYRQGQFLNVRGEKTSESSFYQALSKACESWSD IKLVDYCCCESILIDDQGSSWKSYAPTYYVFLELDGSGKLTAEQKNKIDEILAEQSYVYKSFRTKGSIRPMVVKIVRPGT FKELREFTIETTTASANQYKIPRTLKRKEAVNFVLDRVIKGD |
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