Gene
| Gene Model ID | pfu_aug2.0_94.1_13581 |
|---|---|
| Locus | scaffold94.1 : 311165 ... 323039 : - |
| To GenomeBrowser | scaffold94.1:311165..323039 |
| Genes list of scaffold | scaffold94.1 |
| Synonym | pfu_aug1.0_91.1_65233 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hand2 protein | GO:0000790 GO:0000977 GO:0001077 GO:0003142 GO:0003144 GO:0003151 GO:0003342 GO:0003680 GO:0006915 GO:0007399 GO:0007512 GO:0008283 GO:0010002 GO:0014032 GO:0030859 GO:0030878 GO:0035118 GO:0043234 GO:0045944 GO:0046983 GO:0048523 GO:0048703 GO:0050793 GO:0051239 GO:0055007 GO:0060047 GO:0070888 GO:0071908 GO:2000679 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_94.1_13581.t1 | 1 | 1 | HLH | 93 | 144 | 1.3e-18 | 66.4 | 1.6e-22 | 2.4e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_94.1_13581.t1 | gi|573883733|ref|XP_006630021.1| | PREDICTED: heart- and neural crest derivatives-expressed protein 2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_94.1_13581.t1 | gi|556967865|ref|XP_005993037.1| | PREDICTED: heart- and neural crest derivatives-expressed protein 2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_94.1_13581.t1 | gi|154147704|ref|NP_001093695.1| | heart- and neural crest derivatives-expressed protein 2 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_94.1_13581.t1 | gi|10720018|sp|P57102.1|HAND2_DANRE | Heart- and neural crest derivatives-expressed protein 2 | 0.0 |
| pfu_aug2.0_94.1_13581.t1 | gi|54020670|ref|NP_571701.2| | heart- and neural crest derivatives-expressed protein 2 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_94.1_13581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13581.t1 atgagtttaagtgtgagcgggtatccacatcaagggtatccgcatccgggacccatgagccatgaattctatcaatatcc acaatacagatatgcggaccactgtgcagaagccacctattttcagaactgggtacttaacggggtcgggattaacggcc accacccggatattactgtgtcaccggaatcttatggaatgtgcacaccgagtccgactgattatcacggggtcggaggt gacccatacgctcagaactttgaaagatgccttaaaagaagaacaacggcaaataaaaaggaaagaagaaggactcaaag tataaacacagcattcgcacaacttagagggtgtattccaaatgttccatctgacacgaaattatccaaaatcaaaactc tacgattggccactagttatatagcatatcttatggacgtactagctaaagacgatcctacacttacagaaaagggattt aaagcagaattaacaaaaaagaaagatgacagaaaggagaaagaaaaagagaaattgaaggaacaggtgcagcaagaaaa ttcccattcaagtggcaacgaacagtcaccaacgcagatttgtgataaaaaatccaaaggcaggacagggtggccgcaac acgtttgggcgtcggaactaaaatcctag |
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Protein
| Protein ID | pfu_aug2.0_94.1_13581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13581.t1 MSLSVSGYPHQGYPHPGPMSHEFYQYPQYRYADHCAEATYFQNWVLNGVGINGHHPDITVSPESYGMCTPSPTDYHGVGG DPYAQNFERCLKRRTTANKKERRRTQSINTAFAQLRGCIPNVPSDTKLSKIKTLRLATSYIAYLMDVLAKDDPTLTEKGF KAELTKKKDDRKEKEKEKLKEQVQQENSHSSGNEQSPTQICDKKSKGRTGWPQHVWASELKS |
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