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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_94.1_13583
Locus scaffold94.1 : 362797 ... 382618 : -
To GenomeBrowser scaffold94.1:362797..382618
Genes list of scaffold scaffold94.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_94.1_13583.t1 1 1 UcrQ 8 57 1.0e-06 28.4 1.7e-10 1.2e-06 28.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_94.1_13583.t1 gi|195494827|ref|XP_002095006.1| GE19914 [Drosophila yakuba] 5.0e-06
pfu_aug2.0_94.1_13583.t1 gi|21355243|ref|NP_648985.1| CG7580, isoform A [Drosophila melanogaster] 5.0e-06
pfu_aug2.0_94.1_13583.t1 gi|194871951|ref|XP_001972937.1| GG13618 [Drosophila erecta] 6.0e-06
pfu_aug2.0_94.1_13583.t1 gi|195171431|ref|XP_002026509.1| GL15585 [Drosophila persimilis] 1.0e-05

Transcript
Transcript IDpfu_aug2.0_94.1_13583.t1
Definition-
>pfu_aug2.0_94.1_13583.t1
atgggtggcaaaaatttgcacagtcattaccaacgcaataggaatgtgagacaggtagagatttcaccctatgatcaaag
agcgtttgctaaggccatcagctttggtgccccaaatttagtgaaaagatttttaaagaagatgtggattattccagtcc
tgtacactggagaatggttgcggcggtattgcatttgggatttagaggacggcaagaggaaatatagactggaggaattc
caacatctcttcacaggggagaaagcccaatcgtaa

Protein
Protein IDpfu_aug2.0_94.1_13583.t1
Definition-
>pfu_aug2.0_94.1_13583.t1
MGGKNLHSHYQRNRNVRQVEISPYDQRAFAKAISFGAPNLVKRFLKKMWIIPVLYTGEWLRRYCIWDLEDGKRKYRLEEF
QHLFTGEKAQS

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