Gene
| Gene Model ID | pfu_aug2.0_94.1_13588 |
|---|---|
| Locus | scaffold94.1 : 508954 ... 514925 : + |
| To GenomeBrowser | scaffold94.1:508954..514925 |
| Genes list of scaffold | scaffold94.1 |
| Synonym | pfu_aug1.0_11913.1_39258 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear receptor subfamily 0 group b member 1-like | GO:0003677 GO:0003700 GO:0003707 GO:0005634 GO:0006355 GO:0043401 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_94.1_13588.t1 | 1 | 1 | Hormone_recep | 170 | 332 | 7.4e-16 | 57.8 | 9.6e-20 | 1.4e-15 | 56.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_94.1_13588.t1 | gi|524911207|ref|XP_005110471.1| | PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_94.1_13588.t1 | gi|676467893|ref|XP_009058035.1| | hypothetical protein LOTGIDRAFT_105544 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_94.1_13588.t1 | gi|260808486|ref|XP_002599038.1| | hypothetical protein BRAFLDRAFT_245659 [Branchiostoma floridae] | 3.0e-25 |
| pfu_aug2.0_94.1_13588.t1 | gi|130497366|ref|NP_001076416.1| | nuclear receptor subfamily 0 group B member 1 [Danio rerio] | 9.0e-23 |
| pfu_aug2.0_94.1_13588.t1 | gi|530627814|ref|XP_005315684.1| | PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 0 group B member 1 [Chrysemys picta bellii] | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_94.1_13588.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13588.t1 atgttatacctcaaatgtactcaaccccctaccaaatcgtccccgatacagattagacaatacgaggagatgtcctttgc gcctcacgatgtttacatgcgatctcccgcgccggctccctcctcatcccccctttggtcacagcagtgtagcccacaac aaacatttacagcatcacagaatccgtcatcgtcatcacctttgtcgtcgtgctcctctgaaacttgccaagaggagcca atcgatttatcgtgcaaagccgcctctcctgccccgcctcgttctgattccaccggaagttgtgatatgagctccagttc ttcaatgcttcgcaatttgttgtcccgcggaaaacatgaaaatgatgcacaatttggaaatttcaaagatctcagtgaca atttagactctgaacaaatccctccgatcaggaacgttaacgggaccactagggtgactttggcaaagaaaaatatgtat ccggtgggttcccgtgtgtcagactggttagttaaaataattcagttttccaagtcgattccggactttgcaaatctgtc tcataacgacaaggtttctctgatactcaacgcttggacgagaattcttctgctttacatggctgagagtaactttcaat ttgctgtgacgccactgagaacggaagtgacgtcaggtgatgacaaagcagtgccgtcacccgaccagcccactatgaaa tctgtagatactattcagaactttattcgcaaatgccaggtgatgaatctcgatcagaaagaatatgcattcctgagaat ggctgttttatttaatgctggatacagtgggttagaccgcccagagcacgttgaccaactgaattccttgatacaacagc ttctgaaggagcacgtgcagacatcccgtccaaatgacgtcatgcactattctcgtctgctcctatgtctgccggcattg tacgggataaactgcaagatgattgagaacctcttttgcaaacacatcaacggcaacatggatatagaaatgcttctaaa ggaaatgctacagaacttataa |
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Protein
| Protein ID | pfu_aug2.0_94.1_13588.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_94.1_13588.t1 MLYLKCTQPPTKSSPIQIRQYEEMSFAPHDVYMRSPAPAPSSSPLWSQQCSPQQTFTASQNPSSSSPLSSCSSETCQEEP IDLSCKAASPAPPRSDSTGSCDMSSSSSMLRNLLSRGKHENDAQFGNFKDLSDNLDSEQIPPIRNVNGTTRVTLAKKNMY PVGSRVSDWLVKIIQFSKSIPDFANLSHNDKVSLILNAWTRILLLYMAESNFQFAVTPLRTEVTSGDDKAVPSPDQPTMK SVDTIQNFIRKCQVMNLDQKEYAFLRMAVLFNAGYSGLDRPEHVDQLNSLIQQLLKEHVQTSRPNDVMHYSRLLLCLPAL YGINCKMIENLFCKHINGNMDIEMLLKEMLQNL |
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