Gene
| Gene Model ID | pfu_aug2.0_942.1_08024 |
|---|---|
| Locus | scaffold942.1 : 25216 ... 66907 : + |
| To GenomeBrowser | scaffold942.1:25216..66907 |
| Genes list of scaffold | scaffold942.1 |
| Synonym | pfu_aug1.0_24982.1_40530 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium channel subfamily t member 1-like | GO:0006813 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_942.1_08024.t1 | 1 | 1 | Ion_trans_2 | 182 | 247 | 3.6e-10 | 39.4 | 1.8e-13 | 8.9e-10 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_942.1_08024.t1 | gi|755497362|ref|XP_006497952.2| | PREDICTED: potassium channel subfamily T member 1 isoform X10 [Mus musculus] | 0.0 |
| pfu_aug2.0_942.1_08024.t1 | gi|524910101|ref|XP_005109933.1| | PREDICTED: potassium channel subfamily T member 1-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_942.1_08024.t1 | gi|676444165|ref|XP_009050341.1| | hypothetical protein LOTGIDRAFT_91366, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_942.1_08024.t1 | gi|752897462|ref|XP_011267037.1| | PREDICTED: potassium channel subfamily T member 2 isoform X9 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_942.1_08024.t1 | gi|380016836|ref|XP_003692378.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_942.1_08024.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_942.1_08024.t1 atggccgccggaggctctgattggctgagagttcgcgtggagttctttaccaatgaaagatcactgaaagagcgacttca attatacttcatcaaaaatcagagatcaagtttaaggatacgaatcttcaatttggtgctgaagttgttgacatttttcc tgtacatcggacgagtactgacagatagagtaccaatatgttcagaagagcaagcggtgagtggaaacatcacagactgc catcacgtgattccctcagacgaattcagggaaaatcctgtcatcaaatggaatcatatagtgtttgtaaaccggaacga gggtttgtggatcgcccaggtgacggccgccattatcagtttagtggagaccattcttgtccagtatctcagttacaagg ggaacatcctccagcagattttgtccatgacatttttagtggagctgctgaccaccgtaccgtttgttatcacgaatgac ctacacagagttatgatgaaggctcagtcagcgttagcacaacagctcatgatcctcttagctaccatattgtgccttgt tacgttcagtgtccttggtattgagcatttacagcggggcggcaatcagcagtttgacttgctcagatctttctggttca cggttgtaacgttttccaccgttggttacggcgatatttacccagatatctggatatctcagctctatatgatcatgatg atttgtgccatacttattgtattacccactcagctggaacagttagcttacacattgttagaaagacaaaaacaaggtgg tgcgtatagcagccatagagcccagatggagaggcatgtggtggtttgtacaactgtattacaggcggatactctgcttg attttctcaacgaattttatgctcatcctaaacttcaggactactatgtagtattactgtctccctgcgagctggactcg acgatgaaggttttgctacaggtacctatctgggcacagagggttatatttatacagggatcagctttaaaagactttga tctgacacgatgcagaatacaggatgcagaggcttgttttatattggctgccaggaactatgtagacaggggagcagctg atcagcacacgatactcagatcgtgggctataaaggactttgccccacactgtcctcagtatgtacagatattcagacca gaaaacaagttccatgtcaaatttgctggtgaatctgagactgatgatttattaagtactgtagcattagaattacaaca cacaaaaatatctgaggaatcctcgacacaacgacggcccaaccatttggagttacctaagggcctgaacatacgctcgc ttcagaagcgacctagtatagctcccgtccctgccgtactggaggccaacgatatacgtcttcaaatcagctcagacgga gactctgacgatgaggaatctgatatcccttttgctgatgcagcagatgagcaatttccagagtatattagaggctttcc ccccatcactccatatataggtacaagtcctacactctgtcacttgatgaaagagaaaagaccactatgctgccttcaac ttgccactgagtgtgaacactgtagttatgatgatgccaaagaataccactggccaaaccgtgccgttattgtatgtgcc gactttgccagcagtggtctgtataatttcatcgtgccattacgatctcatgcaaggccaaaaaactcactcaatccaat tgtgctactactggagaaaaaaccagattccacatttctggagacaatctgtcatttcccactagtattttggatgaagg gaaacattgaatggtctagttctgatcaaaccggtagcattgacgaccttctacgggcgggaatcaatatggcagaccat gtggtgatcgtcaataaagagacatcaaattctgcagaggaggaggccctgtcagactgtaatacaatagtggccgtaca gacaatcttcagattaccgtttgccggagggaatgtattcagtgccagcatgttagatactcttctttatcaggcttttg ttaaggattacctaatcacatttgtaaggttgttgttaggcattgatcaagctgtcggctctggacatttatcatgtatg aagattaccaaagaggatctctggatacgtacatacggacgtctttatcagaaactttgctcaactacatgtgaaattcc cattggtatataccgtacccagatccagccgcggagtgccggtatgactgcgccctctggtggggaaggagccaattcga ttcgacgtaaacccggctcaggaaggagagctcagaccaaaaatgtgagcctaagtatggtagggctggaagtagataac agtaatcagatgaccccagagagacatgagatttcacagatggtacgatgccgtatgcagagcctgggacagcctcaaga tgattatcaagttacaagtgacacaaaaaggaacactatatcatatgtgataataaaccctagctatgacctaagactcc aacttgatgatgttatttacctcataagaccaagttcactttcaccgcagccgtctcctctcatagacgaacggaaactt catgtacaaaaccaggtgttacagaaaagagaagagccgacaggggcagataaccccgatatatacaaaaaatgtcagca aggtttaggaagtacaaattcacttccaggggaaaagaatggaattttgaagaataatacaaggaatagcgaaaaaagcc tgaagagtgcaggatctagtaacagaattcctgtaatttacacggagagtgacacttctgatgatgaacttgagtatcaa gaaaagacgtctgtagatcgacctatatttcacctggaaagcattccaactgaagtcaataaaaaagaaatatcggaaga agtggagggcctcaaaggcacagtggtttga |
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Protein
| Protein ID | pfu_aug2.0_942.1_08024.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_942.1_08024.t1 MAAGGSDWLRVRVEFFTNERSLKERLQLYFIKNQRSSLRIRIFNLVLKLLTFFLYIGRVLTDRVPICSEEQAVSGNITDC HHVIPSDEFRENPVIKWNHIVFVNRNEGLWIAQVTAAIISLVETILVQYLSYKGNILQQILSMTFLVELLTTVPFVITND LHRVMMKAQSALAQQLMILLATILCLVTFSVLGIEHLQRGGNQQFDLLRSFWFTVVTFSTVGYGDIYPDIWISQLYMIMM ICAILIVLPTQLEQLAYTLLERQKQGGAYSSHRAQMERHVVVCTTVLQADTLLDFLNEFYAHPKLQDYYVVLLSPCELDS TMKVLLQVPIWAQRVIFIQGSALKDFDLTRCRIQDAEACFILAARNYVDRGAADQHTILRSWAIKDFAPHCPQYVQIFRP ENKFHVKFAGESETDDLLSTVALELQHTKISEESSTQRRPNHLELPKGLNIRSLQKRPSIAPVPAVLEANDIRLQISSDG DSDDEESDIPFADAADEQFPEYIRGFPPITPYIGTSPTLCHLMKEKRPLCCLQLATECEHCSYDDAKEYHWPNRAVIVCA DFASSGLYNFIVPLRSHARPKNSLNPIVLLLEKKPDSTFLETICHFPLVFWMKGNIEWSSSDQTGSIDDLLRAGINMADH VVIVNKETSNSAEEEALSDCNTIVAVQTIFRLPFAGGNVFSASMLDTLLYQAFVKDYLITFVRLLLGIDQAVGSGHLSCM KITKEDLWIRTYGRLYQKLCSTTCEIPIGIYRTQIQPRSAGMTAPSGGEGANSIRRKPGSGRRAQTKNVSLSMVGLEVDN SNQMTPERHEISQMVRCRMQSLGQPQDDYQVTSDTKRNTISYVIINPSYDLRLQLDDVIYLIRPSSLSPQPSPLIDERKL HVQNQVLQKREEPTGADNPDIYKKCQQGLGSTNSLPGEKNGILKNNTRNSEKSLKSAGSSNRIPVIYTESDTSDDELEYQ EKTSVDRPIFHLESIPTEVNKKEISEEVEGLKGTVV |
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