Gene
| Gene Model ID | pfu_aug2.0_943.1_11323 |
|---|---|
| Locus | scaffold943.1 : 182525 ... 206656 : + |
| To GenomeBrowser | scaffold943.1:182525..206656 |
| Genes list of scaffold | scaffold943.1 |
| Synonym | pfu_aug1.0_16324.1_25506 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_943.1_11323.t1 | 5 | 1 | WD40 | 7 | 31 | 4.5e-17 | 61.2 | 0.11 | 820.0 | 0.1 |
| pfu_aug2.0_943.1_11323.t1 | 5 | 2 | WD40 | 76 | 112 | 4.5e-17 | 61.2 | 7.6e-06 | 0.056 | 13.3 |
| pfu_aug2.0_943.1_11323.t1 | 5 | 3 | WD40 | 123 | 158 | 4.5e-17 | 61.2 | 3.1e-12 | 2.3e-08 | 33.5 |
| pfu_aug2.0_943.1_11323.t1 | 5 | 4 | WD40 | 253 | 274 | 4.5e-17 | 61.2 | 0.00087 | 6.5 | 6.8 |
| pfu_aug2.0_943.1_11323.t1 | 5 | 5 | WD40 | 303 | 318 | 4.5e-17 | 61.2 | 0.081 | 600.0 | 0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_943.1_11323.t1 | gi|676474469|ref|XP_009060160.1| | hypothetical protein LOTGIDRAFT_203162 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_943.1_11323.t1 | gi|524908187|ref|XP_005109199.1| | PREDICTED: nucleoporin Nup37-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_943.1_11323.t1 | gi|260825542|ref|XP_002607725.1| | hypothetical protein BRAFLDRAFT_114714 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_943.1_11323.t1 | gi|557019470|ref|XP_006010088.1| | PREDICTED: nucleoporin Nup37 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_943.1_11323.t1 | gi|527264551|ref|XP_005150498.1| | PREDICTED: nucleoporin Nup37 [Melopsittacus undulatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_943.1_11323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_943.1_11323.t1 atggaagaaacaacgacagaatgttttcacagtattccttgtcatgacatcgtgtatgttgcagagtttgctccatatga gtggtgtgcatcgctcttggcagttggaaccaaatctagagtctccgtctttcaatatctaaatgaaccagagtatggta taacagaagaggatggacccaaagatgcattgtacagactcctgtgtgatatacagaatgcctgtagagttacctccctt tcttggtgtccctctacattttatagatatccggaaatggaagatcaaatcagggtagcagcagcagggagtgatcatag aatcagagtgttcaaaacaaaactacagggtgacatagatacaatggtgatggagggccataaagactatatcaattcta tagcctttagccctgtagaggaggataagttactggtgtctacaggggacgacatgacgtgtaggatatgggatggggac ggggtacagaaggagtgtttccagttaggtgccgctggaatgagtgtagccatccatgagagggaaccgcgaaaggtaat ggtggctcagaagaatggagttataaagatattcagccttgaccttcagcagcagattatgtcatatgattgtcggatcg taccgttgatgggagctgattggtgcaggtacgatgaagatatgatcgtggcagcagccggcacagagtggctggtattt caactctctagatctagctatccagttgaaaaaagattagctcacacagacggggcccgtgatgtacgatggtccaagtc tcaccccactctcatagcgaccaaaggcaggcctggtaaacagatcaaagtgttcagtgttaggaatcatcaggtgccct tgaacaccagccttcctatcgcctatggaatgagctggcattatgtgtatcctatactagctgttggaggagacaagaaa gtggacttgtattattgtgatcaaaccaaaagtgacatcagatag |
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Protein
| Protein ID | pfu_aug2.0_943.1_11323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_943.1_11323.t1 MEETTTECFHSIPCHDIVYVAEFAPYEWCASLLAVGTKSRVSVFQYLNEPEYGITEEDGPKDALYRLLCDIQNACRVTSL SWCPSTFYRYPEMEDQIRVAAAGSDHRIRVFKTKLQGDIDTMVMEGHKDYINSIAFSPVEEDKLLVSTGDDMTCRIWDGD GVQKECFQLGAAGMSVAIHEREPRKVMVAQKNGVIKIFSLDLQQQIMSYDCRIVPLMGADWCRYDEDMIVAAAGTEWLVF QLSRSSYPVEKRLAHTDGARDVRWSKSHPTLIATKGRPGKQIKVFSVRNHQVPLNTSLPIAYGMSWHYVYPILAVGGDKK VDLYYCDQTKSDIR |
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