Gene
| Gene Model ID | pfu_aug2.0_944.1_14673 |
|---|---|
| Locus | scaffold944.1 : 65029 ... 182565 : - |
| To GenomeBrowser | scaffold944.1:65029..182565 |
| Genes list of scaffold | scaffold944.1 |
| Synonym | pfu_aug1.0_2687.1_51772 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_944.1_14673.t1 | 6 | 1 | Ldl_recept_a | 271 | 305 | 2.9e-11 | 43.0 | 0.00025 | 0.41 | 10.5 |
| pfu_aug2.0_944.1_14673.t1 | 6 | 2 | Ldl_recept_a | 315 | 329 | 2.9e-11 | 43.0 | 0.83 | 1400.0 | -0.7 |
| pfu_aug2.0_944.1_14673.t1 | 6 | 3 | Ldl_recept_a | 375 | 398 | 2.9e-11 | 43.0 | 2.2e-06 | 0.0036 | 17.1 |
| pfu_aug2.0_944.1_14673.t1 | 6 | 4 | Ldl_recept_a | 408 | 417 | 2.9e-11 | 43.0 | 1.3 | 2200.0 | -1.4 |
| pfu_aug2.0_944.1_14673.t1 | 5 | 1 | LRR_8 | 426 | 460 | 2.1e-14 | 53.0 | 0.14 | 230.0 | 1.6 |
| pfu_aug2.0_944.1_14673.t1 | 4 | 1 | LRR_4 | 451 | 487 | 1.0e-14 | 53.7 | 2.1e-07 | 0.00035 | 20.1 |
| pfu_aug2.0_944.1_14673.t1 | 5 | 2 | LRR_8 | 451 | 510 | 2.1e-14 | 53.0 | 3.0e-05 | 0.049 | 13.3 |
| pfu_aug2.0_944.1_14673.t1 | 5 | 3 | LRR_8 | 474 | 525 | 2.1e-14 | 53.0 | 4.0e-05 | 0.066 | 12.9 |
| pfu_aug2.0_944.1_14673.t1 | 4 | 2 | LRR_4 | 521 | 533 | 1.0e-14 | 53.7 | 1.1 | 1800.0 | -1.4 |
| pfu_aug2.0_944.1_14673.t1 | 4 | 3 | LRR_4 | 563 | 601 | 1.0e-14 | 53.7 | 6.2e-08 | 0.0001 | 21.8 |
| pfu_aug2.0_944.1_14673.t1 | 5 | 4 | LRR_8 | 563 | 605 | 2.1e-14 | 53.0 | 5.8e-08 | 9.6e-05 | 22.0 |
| pfu_aug2.0_944.1_14673.t1 | 4 | 4 | LRR_4 | 611 | 649 | 1.0e-14 | 53.7 | 3.0e-07 | 0.0005 | 19.6 |
| pfu_aug2.0_944.1_14673.t1 | 5 | 5 | LRR_8 | 611 | 656 | 2.1e-14 | 53.0 | 7.3e-10 | 1.2e-06 | 28.1 |
| pfu_aug2.0_944.1_14673.t1 | 6 | 5 | Ldl_recept_a | 733 | 768 | 2.9e-11 | 43.0 | 9.8e-10 | 1.6e-06 | 27.8 |
| pfu_aug2.0_944.1_14673.t1 | 6 | 6 | Ldl_recept_a | 1001 | 1035 | 2.9e-11 | 43.0 | 3.9e-05 | 0.064 | 13.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_944.1_14673.t1 | gi|512851896|ref|XP_004887414.1| | 3.0e-12 | |
| pfu_aug2.0_944.1_14673.t1 | gi|294489260|ref|NP_001170927.1| | relaxin receptor 2 precursor [Danio rerio] | 6.0e-11 |
| pfu_aug2.0_944.1_14673.t1 | gi|157382938|gb|ABV48904.1| | leucine-rich repeat-containing G protein-coupled receptor 8.2 [Danio rerio] | 1.0e-10 |
| pfu_aug2.0_944.1_14673.t1 | gi|704170873|ref|XP_010131738.1| | PREDICTED: relaxin receptor 1-like [Buceros rhinoceros silvestris] | 3.0e-10 |
| pfu_aug2.0_944.1_14673.t1 | gi|328719612|ref|XP_001946943.2| | PREDICTED: protein toll-like [Acyrthosiphon pisum] | 3.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_944.1_14673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_944.1_14673.t1 atgatcaaaggcagatcaaacttcaaccacaaatgtgaaactgatcccaacatcatcaaaagaacgctaggcatgccaga gaatgtttgctgcgaggagatatcgtcggcaggaagtacaatggacgaagaaaaatcacagcacaaggactgcaatgtga aaaactttgcagatgggacaacggaattgctccacaatgtgtttcaacggatgggcaaatgcagtattgccaaattccta tatgtggttggtaccatatactacataaccagacttttgatgcccctactatgtaccggggactgaagcttgcaagaggg ttcccttgagtttccgttaatccaaggacaaatgaaatggacactcattgatctcaatacctatcgagaaattctacctt tagatggaaattctacagatacatcagctgttacattcttcttaactggacccttcgacactaaatttgtactaaaaagt ccaatagtagaggacaagactgacgttagatgtattaggattggatattcattgacgaagtctgcaaatgtcgatgttaa gctgattgatgtgggatcatttcatgaagtaccagacacaccgacaacccttgataacactaatgcagaatgcagtcaat gtgctcggagaatagtagtcaataagtatgacgataaagatgcccagtatcaagcaagggtgtacattttcctatttcac caaggggatttcaacgttacgttggagatcaatagagtaatgctggaacctgaaggggcgtgtctaatggctttagggga atatatggattgtccagacgagcttttcaaatgcatacagcttgaggagagatgtgttcctactgacgtaatcaatgaca agtacatagactgcgtagacagctacgatgaacatcaagagatttggctcgagaaagaaatttgtggtgcagattattta tcatgcaatgaatcacgaagttgcctagtcctacccgcaccgcaaaatctggttactcaatgtagaagcaaccagtcaca tcttcctgtacaaaaaccatctacgtcatgtccatcatattacatgtgtaaacataaggatgtaaagcctccatctttac tcacatgtgtatcgcagtcagaagtgtgtgacggtattccacagtgcccacactgggatgacgaggtcaattgtccactc ttttgtccaccggaatgcacgaagtgtgatttaagacgattccactgtcctccttcggctctaagttcaatatctacacg agtttcctacttggatttatcaggtcatcttcttgatatcaaattagtatgctctgtccaccggctgcgccttgtattcc tgaatgtttcttcatgtggtctcactgacatatcttgcctaagcaatgctgacatatttccgaatcttcgggttctagat gtatcaaagaatagaatttcagttgtttacagagaatcatacaaattcaatattcattttaatactctaattttggacca aaatcccattagattaatcatgattaacgttttaaaaggaaccttgtcattacgtaattctagcattcatactttagaac taagtgaatcgaattcctttcttcttgcctttaattctgtaccctcttggttgaacaaggtcccagtctcagcctttcct gattgtaacctcgggagacttgacctctctttcaatagaattacagagatcaaatcgctggaagaatgctacaatttacg tcatctaatacttcatcagaatgaaataagaaacctttctaactctacattcactgaagacaataacgtacttacaaatc tcaccctcagtgccaatatgatacaaaacttggaagccgctttctttcaaagatttaaaaatttaaaatttctaaactta tccatgaacaccatcaatgaaataaaagaaggaacatttgggtatatgtattccatgctttctccataccgggaatttac gtatttgttctatgtccttctgtgtccaattaccattcttatcctattactgtgtgaagttataagagtgaaaatcagga gaacggagaagatcaattcaccatcttccgatacggaatcatcttccaatgtgatgtgtttgttctttgtcctccgtcac tgcatttcctgtgttcctgtgtttatgttagcaggacgatgtacagatttgcagtaccaatgtttcaacggagactgtat tgatttggaaagtttttgtaatgagagacctgactgtaaagataaatctgatgaaaccgattgtttcaatgagtgtttgc tacggggagatattgttggtaggaagtacaatggacaaaggcgaatcacagcacaaggactgcactgtaacaaaccatgc agatgggacggaatagctccacaatgtgtctcacaggatggacaaatacagtattgtcaaatccctatatgtggtagctt gcaagagcgatcccttgagtatccattaggccaaggacaaatgaaatggaaactaattgatctaaatacttaccaagtaa ttggacctacaggtctcgaatatgaaaactatacagacacaccagtcggcagattctccttcaccggactctctgatagt aaatttgtattgagaagtccaatagtagaggtcacaactaacgttggatgtgttagaattgaatattcattgatgaagtc tgcaaatgtcgacgttaagctgatcgaatggggatcattttatgaagtaccaggcacaccgaaaactcttgataacacta atgcagaatgcagccaatgtgctcggagcatagaaatctatgtaaatgacgaaaaagaaaatcggtatcaagtaaagctg tacattttcctatttcaccaaggaaatttcaaccttacgttagaaatcataagggtaacattagaggctgtaggaggatg tggagtttatacagataccgattcaataggagaatatatagagtgctcggaggagcttttcaaatgcatggagcttgacg agagatgtgttcctacggatgttatcaatgacaagtatgaagactgtggtgacacatttgatgaacatctaggcaagcgt tccaaggttccactatacctggaaaatacgtacttcttctatgttttcttatgtccagtagcggtcctcattgtcatact aagtgaagtgattaggctaaaacggagacaaagaaggaaaggaaatatacatgtaccatctaatggtacggaatcatctt ccaatgtgatgtgtttgttgtatgttctcaatcactgcattagctgcattcctgtgtttatcttaggatacatggcttta ttggaaagacaagtgaccgatgaaacatataaatttgtgacaatattcattatagcaacgccttcagctgtcaatccctt agttcagatatatctgctgctgaacgagccagacactccattcattcaaaagggttttattggtcgtggattctttgctg gatttagaataatcggatccgatttctatagaagatactgctttattgttgatcgtgaaataaagggaaatgccccctcg tttagtcctccattcgtctgcgtacatacgaggaatgaggcatctctatgtggttacccattccagaattggcagagata ttttgtttcgggtgcgttcacagggaatggaaactatgtaaatgcttgctattggaacgaaagatggcctgaaataccga ttttcgaaaggaaccagcttttgaccaatccgttattttgcttgccctga |
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Protein
| Protein ID | pfu_aug2.0_944.1_14673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_944.1_14673.t1 MIKGRSNFNHKCETDPNIIKRTLGMPENVCCEEISSAGSTMDEEKSQHKDCNVKNFADGTTELLHNVFQRMGKCSIAKFL YVVGTIYYITRLLMPLLCTGDXSLQEGSLEFPLIQGQMKWTLIDLNTYREILPLDGNSTDTSAVTFFLTGPFDTKFVLKS PIVEDKTDVRCIRIGYSLTKSANVDVKLIDVGSFHEVPDTPTTLDNTNAECSQCARRIVVNKYDDKDAQYQARVYIFLFH QGDFNVTLEINRVMLEPEGACLMALGEYMDCPDELFKCIQLEERCVPTDVINDKYIDCVDSYDEHQEIWLEKEICGADYL SCNESRSCLVLPAPQNLVTQCRSNQSHLPVQKPSTSCPSYYMCKHKDVKPPSLLTCVSQSEVCDGIPQCPHWDDEVNCPL FCPPECTKCDLRRFHCPPSALSSISTRVSYLDLSGHLLDIKLVCSVHRLRLVFLNVSSCGLTDISCLSNADIFPNLRVLD VSKNRISVVYRESYKFNIHFNTLILDQNPIRLIMINVLKGTLSLRNSSIHTLELSESNSFLLAFNSVPSWLNKVPVSAFP DCNLGRLDLSFNRITEIKSLEECYNLRHLILHQNEIRNLSNSTFTEDNNVLTNLTLSANMIQNLEAAFFQRFKNLKFLNL SMNTINEIKEGTFGYMYSMLSPYREFTYLFYVLLCPITILILLLCEVIRVKIRRTEKINSPSSDTESSSNVMCLFFVLRH CISCVPVFMLAGRCTDLQYQCFNGDCIDLESFCNERPDCKDKSDETDCFNECLLRGDIVGRKYNGQRRITAQGLHCNKPC RWDGIAPQCVSQDGQIQYCQIPICGSLQERSLEYPLGQGQMKWKLIDLNTYQVIGPTGLEYENYTDTPVGRFSFTGLSDS KFVLRSPIVEVTTNVGCVRIEYSLMKSANVDVKLIEWGSFYEVPGTPKTLDNTNAECSQCARSIEIYVNDEKENRYQVKL YIFLFHQGNFNLTLEIIRVTLEAVGGCGVYTDTDSIGEYIECSEELFKCMELDERCVPTDVINDKYEDCGDTFDEHLGKR SKVPLYLENTYFFYVFLCPVAVLIVILSEVIRLKRRQRRKGNIHVPSNGTESSSNVMCLLYVLNHCISCIPVFILGYMAL LERQVTDETYKFVTIFIIATPSAVNPLVQIYLLLNEPDTPFIQKGFIGRGFFAGFRIIGSDFYRRYCFIVDREIKGNAPS FSPPFVCVHTRNEASLCGYPFQNWQRYFVSGAFTGNGNYVNACYWNERWPEIPIFERNQLLTNPLFCLP |
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