Gene
| Gene Model ID | pfu_aug2.0_95.1_16894 |
|---|---|
| Locus | scaffold95.1 : 17755 ... 27095 : - |
| To GenomeBrowser | scaffold95.1:17755..27095 |
| Genes list of scaffold | scaffold95.1 |
| Synonym | pfu_aug1.0_28476.1_62529 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| deoxyribonuclease-1 isoform x1 | GO:0004518 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_95.1_16894.t1 | 1 | 1 | Exo_endo_phos | 39 | 266 | 2.0e-06 | 27.9 | 3.3e-10 | 2.5e-06 | 27.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_95.1_16894.t1 | gi|597763330|ref|XP_007245609.1| | PREDICTED: deoxyribonuclease-1-like isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_95.1_16894.t1 | gi|667287647|ref|XP_008576558.1| | PREDICTED: deoxyribonuclease-1 [Galeopterus variegatus] | 0.0 |
| pfu_aug2.0_95.1_16894.t1 | gi|554557207|ref|XP_005873023.1| | PREDICTED: deoxyribonuclease-1 isoform X1 [Myotis brandtii] | 0.0 |
| pfu_aug2.0_95.1_16894.t1 | gi|558132529|ref|XP_006090491.1| | PREDICTED: deoxyribonuclease-1 isoform X1 [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_95.1_16894.t1 | gi|505783625|ref|XP_004604211.1| | PREDICTED: deoxyribonuclease-1 [Sorex araneus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_95.1_16894.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16894.t1 atgaagagtgttgccagatacgtaggttttctgatgctgtttcatatcgtagatggtttgcggataggtgcattcaacat tcaagagtttggtaaaaagaaagttggtaatgaaaccattatgaaatatctagcacagatagcagaaagatatgacatac tttcggtagaagaaatccgtgattcttcaggaaaatatcatccattggagaaactgtcaaatcttgtcaagcaaatatca ggaaaacaatactcaacaatagtaagcgaaccactaggaaaggacaaagagcaattaggatttatttacagatcagggat atcggttcttaaaaaagtcgtatttgatgatggaaaacctcgctattttactcgtgatccattcctggtacagttttcaa agttgggcacgaacacaaaagagatggttcttggaagcgtacatacgaagccagataaatccgttactccaaaagagata gccaacttaaaattggtttttcaatttgccgaaaaatatttcaattctcagaacataattctcatgggagacttaaatgc cggtaggaattatgttaaagattggtcggaaattcccattaaaaatgatcctcacgtccattggttaataaatgatcacg tggatacgacggtcggtgaaagtggacaagcttacgacagaatattgctaaaaggagaaaaattgctgggatccgtggtg aagaaaagtaatacaactttcaacttcaaaacacagtatcaacttaccaatcaaatggcacaagccatcagtgaccattt tccggtggaatgtaaattgacatag |
|
Protein
| Protein ID | pfu_aug2.0_95.1_16894.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16894.t1 MKSVARYVGFLMLFHIVDGLRIGAFNIQEFGKKKVGNETIMKYLAQIAERYDILSVEEIRDSSGKYHPLEKLSNLVKQIS GKQYSTIVSEPLGKDKEQLGFIYRSGISVLKKVVFDDGKPRYFTRDPFLVQFSKLGTNTKEMVLGSVHTKPDKSVTPKEI ANLKLVFQFAEKYFNSQNIILMGDLNAGRNYVKDWSEIPIKNDPHVHWLINDHVDTTVGESGQAYDRILLKGEKLLGSVV KKSNTTFNFKTQYQLTNQMAQAISDHFPVECKLT |
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