Gene
| Gene Model ID | pfu_aug2.0_95.1_16903 |
|---|---|
| Locus | scaffold95.1 : 229497 ... 242476 : - |
| To GenomeBrowser | scaffold95.1:229497..242476 |
| Genes list of scaffold | scaffold95.1 |
| Synonym | pfu_aug1.0_6953.1_02352 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase nek2 | GO:0004674 GO:0005524 GO:0005634 GO:0005694 GO:0006468 GO:0007059 GO:0007067 GO:0007098 GO:0015630 GO:0043234 GO:0044430 GO:0070507 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_95.1_16903.t1 | 2 | 1 | Pkinase | 42 | 302 | 0.0 | 215.9 | 0.0 | 0.0 | 215.6 |
| pfu_aug2.0_95.1_16903.t1 | 1 | 1 | Pkinase_Tyr | 44 | 300 | 3.30006e-41 | 141.0 | 1.54143e-44 | 4.49999e-41 | 140.6 |
| pfu_aug2.0_95.1_16903.t1 | 1 | 1 | Kinase-like | 168 | 292 | 1.8e-07 | 30.4 | 1.1e-10 | 3.4e-07 | 29.5 |
| pfu_aug2.0_95.1_16903.t1 | 2 | 2 | Pkinase | 302 | 331 | 0.0 | 215.9 | 0.28 | 830.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_95.1_16903.t1 | gi|676433854|ref|XP_009047036.1| | hypothetical protein LOTGIDRAFT_138592 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_95.1_16903.t1 | gi|524899618|ref|XP_005106238.1| | PREDICTED: serine/threonine-protein kinase Nek2-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_95.1_16903.t1 | gi|524899612|ref|XP_005106235.1| | PREDICTED: serine/threonine-protein kinase Nek2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_95.1_16903.t1 | gi|524899614|ref|XP_005106236.1| | PREDICTED: serine/threonine-protein kinase Nek2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_95.1_16903.t1 | gi|260830605|ref|XP_002610251.1| | hypothetical protein BRAFLDRAFT_115429 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_95.1_16903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16903.t1 atgaaaaggggaggtaagggggtgggagagaggtacccccgtccccctccccgtaacgtaactacgtaccgtaccacgta cgtactacttcttacgcccaagatgcccagcacgttggaggattttgaagtcctgtctactataggatcagggtcgtatg gcacatgtaagaaaatacgacggaaaaaggatggcaagatactggtgtggaaagaaatggaatatggaacgatgacagag tcggagaaactgatgctggtgtcggaagtcaacctgctccgagagctgaaacatcaacatatcgtacgatactacgacag gatcatagatagaagtaaaactaccatctatatcatcatggagtattgtgacggtggggatctggctcagcttatatcct ctagtagaaggacaggctcttttcttgatgaggaatttatatggaagatgttaattcagataacgtcagcattaaaagaa tgtcaccgacgtaagaacggtaaagctgttctacatcgagaccttaaaccagctaacatattcctagatgccgataaaaa cgtgaagttgggtgattttggtcttgccagggtgttgcatcacgaaacaagttttgccaaaacctacgtgggaacaccgt attatatgtcaccagagttagtgaacaacatgtcctacaacgagaagtctgacatctgggccatgggatgtatgttgtac gagttgtgtgccctccacccacccttcactgcttccaatcagctcgatctcaacaggaaaatctgtgtgggcgattacag tagaattcctctacgctataccgatgatctcaacgctattatatcaaaactactcagggtagaagtacacaaaaggccga gtatagaagatgtccttcatgactcggtagttgtgaggaggataaagaggttggaaaggaagaattctcacgagaaagtg gaagctcaagtagaaacaaaatctagtcatgaatctctcaagtcttgggaagcagagctcaaactctgggagagaagaat ggaatcaaaggaggaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnttgggaagcagagctcaaactctgggagagaagaatggaatcaaaggaggaggaacttaagagttaa |
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Protein
| Protein ID | pfu_aug2.0_95.1_16903.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16903.t1 MKRGGKGVGERYPRPPPRNVTTYRTTYVLLLTPKMPSTLEDFEVLSTIGSGSYGTCKKIRRKKDGKILVWKEMEYGTMTE SEKLMLVSEVNLLRELKHQHIVRYYDRIIDRSKTTIYIIMEYCDGGDLAQLISSSRRTGSFLDEEFIWKMLIQITSALKE CHRRKNGKAVLHRDLKPANIFLDADKNVKLGDFGLARVLHHETSFAKTYVGTPYYMSPELVNNMSYNEKSDIWAMGCMLY ELCALHPPFTASNQLDLNRKICVGDYSRIPLRYTDDLNAIISKLLRVEVHKRPSIEDVLHDSVVVRRIKRLERKNSHEKV EAQVETKSSHESLKSWEAELKLWERRMESKEEXXXXXXXXXXXXXXXXXXXXXXXXWEAELKLWERRMESKEEELKS |
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