Gene
| Gene Model ID | pfu_aug2.0_95.1_16905 |
|---|---|
| Locus | scaffold95.1 : 298221 ... 308726 : - |
| To GenomeBrowser | scaffold95.1:298221..308726 |
| Genes list of scaffold | scaffold95.1 |
| Synonym | pfu_aug1.0_14052.1_39574 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein giant | GO:0003700 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_95.1_16905.t1 | 1 | 1 | bZIP_2 | 335 | 388 | 1.8e-16 | 59.7 | 8.0e-20 | 3.0e-16 | 58.9 |
| pfu_aug2.0_95.1_16905.t1 | 1 | 1 | bZIP_1 | 342 | 393 | 1.6e-06 | 27.9 | 1.0e-09 | 3.7e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_95.1_16905.t1 | gi|242000676|ref|XP_002434981.1| | protein giant, putative [Ixodes scapularis] | 4.00001e-41 |
| pfu_aug2.0_95.1_16905.t1 | gi|524899363|ref|XP_005106114.1| | PREDICTED: ell-associated factor Eaf-like [Aplysia californica] | 1.0e-37 |
| pfu_aug2.0_95.1_16905.t1 | gi|291234179|ref|XP_002737021.1| | PREDICTED: flocculation protein FLO11-like [Saccoglossus kowalevskii] | 2.0e-31 |
| pfu_aug2.0_95.1_16905.t1 | gi|572310157|ref|XP_006620848.1| | PREDICTED: protein giant-like isoform X1 [Apis dorsata] | 5.0e-28 |
| pfu_aug2.0_95.1_16905.t1 | gi|571551883|ref|XP_006560499.1| | PREDICTED: thyrotroph embryonic factor isoform X3 [Apis mellifera] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_95.1_16905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16905.t1 atggctgacaatggagtcaatgaaaagcatggtgaagtattacatactttaatttcggccaatcacattaaagaaaacat ccacagtatgtgcaatggtaatggaacttcggagcacgttgttgtaaaggaggaggtaagcggctatggatcagatgatt cactgaactcccctcttgacttctccttcaaacgtaaaaatggtgattcagagacgtcagaagttgactcctactccccc gcctcgttacatggcgccagtttaggcagccacgcagacgacaacaaatactcattttacgaacagactacctccaattc agattcacagaaaaatggtgagagttcagaagatacagatcataaaatcggcgagcctccgttggctggtacggatcctt cccgtaatgtccctccagggtttgcatccatggtccgtgcgttccagtctggaagcttgtcaccagctgccgcggccagg atgatcaatgcctttcccgccatgggctctgtattagagccccgtattgctcaagctaacaaatcagcccgtcctttcaa atcatatccaaacgaaacattgtcaatgcccataggctgctatggggtatcgggttttaatccgtttcagactctagatg caagtgttatacaaaatctcaatgaaatgaacagcgaggaactattgaatgtatataaacatcagttacacgtcatgcag gaacatgctaggacggttcggagtagctcacagtcatccgagtcgggctctgtttctgccacaagttcatcaacgggttt aaattccagtattaccagagtatcaaatcacccccatcatcaacattacgcaaatcatcgtcatagcagtaccagtagcc caccgggcgtctccagcccaggtctggcgctctcgcccaatcactcgatccccagcacaagcgatatgtctctacaaaat gcgatgtcacgaaaaaggccgaggagtctgccggacaatcagaaagacgaggcatactgggagagaaggcgcaaaaacaa cgaagcagccaaacgttctcgcgacgcccgacgggcaaaagaggatcaaatcgccattagggcagctttattagaacaag aaaatatgaaactgagagtagaggtggcagcattgaaaactgaaacagcaaaattacgttgtatgttgtacaacagctga |
|
Protein
| Protein ID | pfu_aug2.0_95.1_16905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16905.t1 MADNGVNEKHGEVLHTLISANHIKENIHSMCNGNGTSEHVVVKEEVSGYGSDDSLNSPLDFSFKRKNGDSETSEVDSYSP ASLHGASLGSHADDNKYSFYEQTTSNSDSQKNGESSEDTDHKIGEPPLAGTDPSRNVPPGFASMVRAFQSGSLSPAAAAR MINAFPAMGSVLEPRIAQANKSARPFKSYPNETLSMPIGCYGVSGFNPFQTLDASVIQNLNEMNSEELLNVYKHQLHVMQ EHARTVRSSSQSSESGSVSATSSSTGLNSSITRVSNHPHHQHYANHRHSSTSSPPGVSSPGLALSPNHSIPSTSDMSLQN AMSRKRPRSLPDNQKDEAYWERRRKNNEAAKRSRDARRAKEDQIAIRAALLEQENMKLRVEVAALKTETAKLRCMLYNS |
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