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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_95.1_16909
Locus scaffold95.1 : 409421 ... 415192 : +
To GenomeBrowser scaffold95.1:409421..415192
Genes list of scaffold scaffold95.1
Synonym pfu_aug1.0_4180.1_66905

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_95.1_16909.t1 1 1 Glyco_transf_10 23 368 0.0 244.3 0.0 0.0 244.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_95.1_16909.t1 gi|557753192|ref|XP_005176341.1| PREDICTED: alpha-(1,3)-fucosyltransferase C [Musca domestica] 0.0
pfu_aug2.0_95.1_16909.t1 gi|195432332|ref|XP_002064177.1| GK20026 [Drosophila willistoni] 0.0
pfu_aug2.0_95.1_16909.t1 gi|157123348|ref|XP_001660128.1| AAEL000244-PA [Aedes aegypti] 0.0

Transcript
Transcript IDpfu_aug2.0_95.1_16909.t1
Definition-
>pfu_aug2.0_95.1_16909.t1
atgctatttaaacagacaaagggtcccaatacacgctcacagagaggaatatctacgaagatactgtgtttatttacaac
cattctttcctttttgacgatttgttttatcttcaaagacaaacagtattctacggacttaacgaatgtatactacattt
ccaaggcagaatctgtaactgtaacaacaaattattctaattctaatagtcaaaagaagattatcttgttttggaatcca
tcgagtgaatttaaagcacatatgataaataaccggaagtgcttcagaagtaaatgctggatgacatctgataggtcaat
atttgatagatctgatgcggtcgttttcagtatggaagagaagttagttctaccaaagaagcgatacggacagatatggg
tgtccagagcaatggaatccccggataattgtcaatactccattaaaagctggaaaaataaattcaactggacattgacg
tatagaagagattctgatttgttggctctttacggtggcttcaggccatataagagaaataactcagttttgaattacaa
tgaccttctgaaacagaagtcaaagcacgtcctgtggtttgctagtaactgctacacgactggtgcgaaggaacgtttat
catttgtgaaaatgttacaagacgcattccgtgttgacgttataggaaaatgtggaacggaatcttgtccaaggtcagac
aaagactgtagaagacgcctgctcaatgaaacatacacattctatttttctttcgaaaattcaatttgcagagattacgt
cacagaaaaagtgtatgacgtcatgaataacctgatagttccaatcataagatgtggagtcaattcgaccatttttcttc
caccaaagtcatatattgacatcacagattttaaacaagcgtcctttttgggacattttttacacgaattggcttccaat
gaaaagaaatatggcgagtatttcaaatggaggacatcgtttgaggccagaagtcctgtgccagacgtatggtgcgttct
ttgtcataaacttcataaccaaaataaatatagacgattgtacagggacgtcagtgattggtggagagggaatgacaaga
attctgggaaaatgtgtaaatcaaagttatctacaatgaacacttag

Protein
Protein IDpfu_aug2.0_95.1_16909.t1
Definition-
>pfu_aug2.0_95.1_16909.t1
MLFKQTKGPNTRSQRGISTKILCLFTTILSFLTICFIFKDKQYSTDLTNVYYISKAESVTVTTNYSNSNSQKKIILFWNP
SSEFKAHMINNRKCFRSKCWMTSDRSIFDRSDAVVFSMEEKLVLPKKRYGQIWVSRAMESPDNCQYSIKSWKNKFNWTLT
YRRDSDLLALYGGFRPYKRNNSVLNYNDLLKQKSKHVLWFASNCYTTGAKERLSFVKMLQDAFRVDVIGKCGTESCPRSD
KDCRRRLLNETYTFYFSFENSICRDYVTEKVYDVMNNLIVPIIRCGVNSTIFLPPKSYIDITDFKQASFLGHFLHELASN
EKKYGEYFKWRTSFEARSPVPDVWCVLCHKLHNQNKYRRLYRDVSDWWRGNDKNSGKMCKSKLSTMNT

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