Gene
| Gene Model ID | pfu_aug2.0_95.1_16912 |
|---|---|
| Locus | scaffold95.1 : 458911 ... 464770 : - |
| To GenomeBrowser | scaffold95.1:458911..464770 |
| Genes list of scaffold | scaffold95.1 |
| Synonym | pfu_aug1.0_13912.1_25242 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_95.1_16912.t1 | 1 | 1 | Plant_tran | 129 | 301 | 5.0e-11 | 42.3 | 3.3e-13 | 9.9e-10 | 38.1 |
| pfu_aug2.0_95.1_16912.t1 | 1 | 1 | DDE_Tnp_1 | 146 | 292 | 4.2e-07 | 29.7 | 7.8e-09 | 2.3e-05 | 24.0 |
| pfu_aug2.0_95.1_16912.t1 | 1 | 1 | DDE_Tnp_4 | 149 | 297 | 1.7e-40 | 138.2 | 7.84727e-44 | 2.29999e-40 | 137.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_95.1_16912.t1 | gi|499035959|ref|XP_004568648.1| | PREDICTED: putative nuclease HARBI1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_95.1_16912.t1 | gi|657600151|ref|XP_008304916.1| | PREDICTED: putative nuclease HARBI1 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_95.1_16912.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16912.t1 atggcagcacacgttcgtctgctgcggcaacgaagacgggaatttgaaagaagacgtcgcccacgaatctttagagacag gtctaatccactggaagacttagaggaagatgaagtttttgaacgttataggtttaaacctcaaacaattcttttcatgc tgagcattctccctgattcgacccgtctaaccaacagaaatcaccccctccccccactgttacaaattttgctttgtttg cgctatcttgccactggcgcaatacatcttcttattggtgattccctcaatgtttcacggtcgacagctggacgatgcat tcgagatattgccctacaaatatcccgtttaaggaattatataaaattcccaactggaaacagagctagagatgttaaaa gctccttctaccgcattgctggatttccaaatgtcctaggatgcattgacggaacgcacatcaaaattaagaggccaaaa gacaacgagttagactatgtgaaccgtaaaggctggcattctatcaatgttcagatgtgctgtgatgcagatttccggat caccagttgcagtgctagttggccaggatcagtccatgacagccgtgtttttcgctcatcatctctgtgttcccagtttg aaaatggacaacatgatgggttccttcttggggattcagggtatccttgccgacccttcctcatgaccccgtttctaaac ccagagaccgaaccacaagagagattcaatagatctctgtgcagaagccgagttatggtagaacaaacctttggtattct caagagaagatttcagtgtcttcaacgtggccttgtgacaaaaccagaaagagcagtcgtttacacgttggcttgtgtag tgttacacaacataggcatcgagagaggagacatcctggccttggatgacgaaagctatcgacaggaaccagttaatgtg ccaccagccccacgtgcagtaagcggtagaaacgacggcgtggtaatgcgggatcacattgtgtctacttttttttctta g |
|
Protein
| Protein ID | pfu_aug2.0_95.1_16912.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_95.1_16912.t1 MAAHVRLLRQRRREFERRRRPRIFRDRSNPLEDLEEDEVFERYRFKPQTILFMLSILPDSTRLTNRNHPLPPLLQILLCL RYLATGAIHLLIGDSLNVSRSTAGRCIRDIALQISRLRNYIKFPTGNRARDVKSSFYRIAGFPNVLGCIDGTHIKIKRPK DNELDYVNRKGWHSINVQMCCDADFRITSCSASWPGSVHDSRVFRSSSLCSQFENGQHDGFLLGDSGYPCRPFLMTPFLN PETEPQERFNRSLCRSRVMVEQTFGILKRRFQCLQRGLVTKPERAVVYTLACVVLHNIGIERGDILALDDESYRQEPVNV PPAPRAVSGRNDGVVMRDHIVSTFFS |
|