Gene
| Gene Model ID | pfu_aug2.0_952.1_08030 |
|---|---|
| Locus | scaffold952.1 : 136 ... 2607 : + |
| To GenomeBrowser | scaffold952.1:136..2607 |
| Genes list of scaffold | scaffold952.1 |
| Synonym | pfu_aug1.0_167824.1_64642 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_952.1_08030.t1 | 10 | 1 | LRR_7 | 34 | 46 | 2.0e-09 | 36.1 | 3.3 | 4400.0 | -1.2 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 1 | LRR_1 | 36 | 48 | 1.2e-15 | 55.1 | 0.24 | 330.0 | 2.0 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 1 | LRR_4 | 37 | 70 | 2.7e-27 | 93.8 | 2.0e-06 | 0.0027 | 17.2 |
| pfu_aug2.0_952.1_08030.t1 | 4 | 1 | LRR_8 | 39 | 68 | 7.3e-26 | 89.6 | 0.011 | 14.0 | 5.4 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 1 | LRR_6 | 53 | 74 | 3.6e-12 | 45.0 | 7.4e-05 | 0.1 | 12.7 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 2 | LRR_1 | 54 | 70 | 1.2e-15 | 55.1 | 0.0014 | 1.8 | 8.8 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 2 | LRR_7 | 54 | 68 | 2.0e-09 | 36.1 | 0.043 | 57.0 | 4.5 |
| pfu_aug2.0_952.1_08030.t1 | 2 | 1 | LRR_9 | 78 | 129 | 2.0e-07 | 30.7 | 0.091 | 120.0 | 2.1 |
| pfu_aug2.0_952.1_08030.t1 | 4 | 2 | LRR_8 | 80 | 143 | 7.3e-26 | 89.6 | 2.0e-11 | 2.7e-08 | 33.4 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 3 | LRR_1 | 80 | 101 | 1.2e-15 | 55.1 | 0.00078 | 1.1 | 9.6 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 2 | LRR_4 | 82 | 115 | 2.7e-27 | 93.8 | 9.0e-10 | 1.2e-06 | 27.9 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 2 | LRR_6 | 83 | 99 | 3.6e-12 | 45.0 | 0.42 | 560.0 | 1.1 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 3 | LRR_7 | 84 | 93 | 2.0e-09 | 36.1 | 1.1 | 1500.0 | 0.2 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 3 | LRR_6 | 101 | 114 | 3.6e-12 | 45.0 | 8.7e-05 | 0.12 | 12.5 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 4 | LRR_1 | 103 | 120 | 1.2e-15 | 55.1 | 0.00038 | 0.51 | 10.5 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 4 | LRR_7 | 103 | 115 | 2.0e-09 | 36.1 | 0.0054 | 7.2 | 7.2 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 3 | LRR_4 | 131 | 146 | 2.7e-27 | 93.8 | 0.0056 | 7.6 | 6.2 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 4 | LRR_6 | 131 | 144 | 3.6e-12 | 45.0 | 0.036 | 49.0 | 4.4 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 5 | LRR_7 | 131 | 146 | 2.0e-09 | 36.1 | 0.071 | 96.0 | 3.9 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 5 | LRR_1 | 132 | 144 | 1.2e-15 | 55.1 | 0.09 | 120.0 | 3.3 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 4 | LRR_4 | 159 | 195 | 2.7e-27 | 93.8 | 1.3e-10 | 1.7e-07 | 30.6 |
| pfu_aug2.0_952.1_08030.t1 | 4 | 3 | LRR_8 | 159 | 217 | 7.3e-26 | 89.6 | 2.9e-12 | 3.9e-09 | 36.1 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 6 | LRR_1 | 159 | 179 | 1.2e-15 | 55.1 | 0.0015 | 2.1 | 8.7 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 5 | LRR_6 | 159 | 170 | 3.6e-12 | 45.0 | 0.096 | 130.0 | 3.1 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 6 | LRR_7 | 159 | 172 | 2.0e-09 | 36.1 | 0.015 | 20.0 | 5.9 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 6 | LRR_6 | 180 | 193 | 3.6e-12 | 45.0 | 0.0022 | 2.9 | 8.2 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 7 | LRR_7 | 181 | 194 | 2.0e-09 | 36.1 | 0.0012 | 1.6 | 9.2 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 7 | LRR_1 | 182 | 194 | 1.2e-15 | 55.1 | 0.0015 | 2.0 | 8.7 |
| pfu_aug2.0_952.1_08030.t1 | 2 | 2 | LRR_9 | 202 | 292 | 2.0e-07 | 30.7 | 3.5e-10 | 4.7e-07 | 29.5 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 7 | LRR_6 | 206 | 217 | 3.6e-12 | 45.0 | 0.0041 | 5.5 | 7.3 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 5 | LRR_4 | 207 | 244 | 2.7e-27 | 93.8 | 5.1e-07 | 0.00069 | 19.1 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 8 | LRR_1 | 207 | 223 | 1.2e-15 | 55.1 | 0.0029 | 4.0 | 7.8 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 8 | LRR_7 | 207 | 224 | 2.0e-09 | 36.1 | 0.034 | 45.0 | 4.8 |
| pfu_aug2.0_952.1_08030.t1 | 6 | 6 | LRR_4 | 228 | 270 | 2.7e-27 | 93.8 | 1.2e-08 | 1.7e-05 | 24.3 |
| pfu_aug2.0_952.1_08030.t1 | 4 | 4 | LRR_8 | 228 | 268 | 7.3e-26 | 89.6 | 4.0e-11 | 5.5e-08 | 32.4 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 9 | LRR_1 | 228 | 247 | 1.2e-15 | 55.1 | 0.00057 | 0.76 | 10.0 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 8 | LRR_6 | 228 | 241 | 3.6e-12 | 45.0 | 0.021 | 28.0 | 5.2 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 9 | LRR_7 | 228 | 241 | 2.0e-09 | 36.1 | 0.33 | 450.0 | 1.8 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 10 | LRR_1 | 252 | 269 | 1.2e-15 | 55.1 | 0.00062 | 0.83 | 9.9 |
| pfu_aug2.0_952.1_08030.t1 | 9 | 9 | LRR_6 | 252 | 264 | 3.6e-12 | 45.0 | 0.018 | 24.0 | 5.3 |
| pfu_aug2.0_952.1_08030.t1 | 10 | 10 | LRR_7 | 252 | 266 | 2.0e-09 | 36.1 | 0.0011 | 1.5 | 9.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_952.1_08030.t1 | gi|697440053|ref|XP_009663556.1| | PREDICTED: chondroadherin-like protein [Struthio camelus australis] | 2.0e-29 |
| pfu_aug2.0_952.1_08030.t1 | gi|260832388|ref|XP_002611139.1| | hypothetical protein BRAFLDRAFT_88462 [Branchiostoma floridae] | 6.0e-29 |
| pfu_aug2.0_952.1_08030.t1 | gi|260832368|ref|XP_002611129.1| | hypothetical protein BRAFLDRAFT_88472 [Branchiostoma floridae] | 2.0e-27 |
| pfu_aug2.0_952.1_08030.t1 | gi|260832366|ref|XP_002611128.1| | hypothetical protein BRAFLDRAFT_88473 [Branchiostoma floridae] | 2.0e-27 |
| pfu_aug2.0_952.1_08030.t1 | gi|557264170|ref|XP_006017557.1| | PREDICTED: phospholipase A2 inhibitor-like [Alligator sinensis] | 1.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_952.1_08030.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08030.t1 atgagtagaaacatccttttattggcgacagtattcctgtccatgcagacgctgtattcttcttttctgacagacaattg ctcagtttattcgaatattctaatggattgttctaatttaaatttgactgaaataccatctttattggatctaccaaaca acatagaattcctcaatctttcttggaataaaatctccaaaatttccgccaccaatatttcagaagatgataatgttctg aagggaataagcctgtcccataacgaaataagcagccttcaaccggagtcattcggaaacctaaataacttgcaagtgtt ggatctctcatttaataagatacaaggatccatgcttcttaacgaaaacagcattgaagtccttaaagttacgaaactgc aaaatttgagctttcgaggaaatccgattggggcgcttaaaagaatgacttttacttccttttcctattttatgttggaa tatctagacttatccttgtgctctataaagagtctagagaacgactttattcttaaccttcctagtctaaagagactcaa tttaagtcataattacttagaagaatacaaatccgaattcgtagaaacaatgtcagagttaagtacccttgatttaagtt tcaacagaattaatgtcctccacgaatttcctctgacacttaacttaaaagaaatatatctacagaacaataagatatct gctatagataacaatgcgtttgtttctgttcgaaaattgaaatacttgaatctcgcaaataacgatttgagggagttgtc ccccttaagtgtaccgtgggatactgcccagatgtcgctgcgaggaaatccatggagatgtgactgccatatgagatggt tgaaattaccaaataaggaaattgatgtgcaagcaatcaatgtttctatgatatgcgtttacccgagtcgattacgaggg atggatatacgccagttatctgcccctgaccttagttgccctacgtcatacgccggacctgttgttgccgtgttactatc aactttcattgtcctcgtctcattagtcgtcgcctatgctctataccggaagcggaagtccatgccgtgccggaagtcga tggatcagagcggaaattatgttgctgtttatacgcatgacgatatcgacgatacgcatacaaaagtgtcaattgatgag gttaagttggtgggcggaaaggaaatctatgcttaa |
|
Protein
| Protein ID | pfu_aug2.0_952.1_08030.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08030.t1 MSRNILLLATVFLSMQTLYSSFLTDNCSVYSNILMDCSNLNLTEIPSLLDLPNNIEFLNLSWNKISKISATNISEDDNVL KGISLSHNEISSLQPESFGNLNNLQVLDLSFNKIQGSMLLNENSIEVLKVTKLQNLSFRGNPIGALKRMTFTSFSYFMLE YLDLSLCSIKSLENDFILNLPSLKRLNLSHNYLEEYKSEFVETMSELSTLDLSFNRINVLHEFPLTLNLKEIYLQNNKIS AIDNNAFVSVRKLKYLNLANNDLRELSPLSVPWDTAQMSLRGNPWRCDCHMRWLKLPNKEIDVQAINVSMICVYPSRLRG MDIRQLSAPDLSCPTSYAGPVVAVLLSTFIVLVSLVVAYALYRKRKSMPCRKSMDQSGNYVAVYTHDDIDDTHTKVSIDE VKLVGGKEIYA |
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