Gene
| Gene Model ID | pfu_aug2.0_952.1_08033 |
|---|---|
| Locus | scaffold952.1 : 35996 ... 51367 : + |
| To GenomeBrowser | scaffold952.1:35996..51367 |
| Genes list of scaffold | scaffold952.1 |
| Synonym | pfu_aug1.0_8912.1_45960 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 2 isoform x2 | GO:0006508 GO:0008233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_952.1_08033.t1 | 1 | 1 | UCH | 154 | 478 | 0.0 | 195.2 | 0.0 | 0.0 | 193.5 |
| pfu_aug2.0_952.1_08033.t1 | 1 | 1 | UCH_1 | 154 | 459 | 3.1e-14 | 53.1 | 6.8e-18 | 5.1e-14 | 52.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_952.1_08033.t1 | gi|676443858|ref|XP_009050240.1| | hypothetical protein LOTGIDRAFT_226424 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_952.1_08033.t1 | gi|642925759|ref|XP_008201637.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_952.1_08033.t1 | gi|241628902|ref|XP_002410027.1| | ubiquitin-specific protease, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_952.1_08033.t1 | gi|91084663|ref|XP_967750.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_952.1_08033.t1 | gi|512925066|ref|XP_004930749.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_952.1_08033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08033.t1 atgcagctccatactagacttgtttcgaagagtgagatattgaggtacctgatgcgagggcccgtcaaagctacacatga ttactctacctcgtatggttcaacgtatgggacatctggagcgggaactctgggaagacacgggagtctaacgacaaact atacctcttcgtcaggagggtcaaggccaggtagtctgagaggtcgaaggtcaagtagcctggccaacgtaaatgatggg atcgatggacttagaataacagatatcgaaaatgacgatgctcccattcgtagttcacgcaggacaagtcgtttagatga tagttatctttcttccaatgtgacacccagggggtcgagattagagagtgattctagtgatgatattgtgaaatcagaca ctctgaaaagaactaacaggacttcgggaagtctatcacggtactccaatagggggaaagttggtttgcggaatctagga aatacgtgttttatgaactcagttttacagtgccttagcaatacaaaatatttattagaatactgtttggaagacagctt cgaaaaggataaaaatacatcaacaagttcaatgagaggaagtctaattacagcctatgccaaacttatgaaggacatgt ggtcggacaaggattcatatgtatcaccaaacgctttcaagactcagattcaacgatttgcaccccgttttatgggctat gcacaacaggattcccaagaatttttacgctacttattggaaggtctccatgaagatgttaacagggtaacgtctaaacc aaagcctgtctcaatagatgacgacaaattctcaagtgaccaagagaaagctaaggaatactggagagtgtatctaacat atgataacaatttgtttgtgggtcagctgaggagcaccttaaagtttgactgtggtcacgcttcaacaacctttgatcct ttctgggatttgtctcttccgattcctaagggccgatattctgatgccactatctacaaatgtatcaacttatttatgaa agacgagcagttggatcatgatgaattaccggtaagtaacaataaggccaaaaaaagaaatatctctgtttctgaagctg tttgttatcctcgggaacatcgctatgatgtagatttgaagcgttttagtcaaggaagatacagtcaaaaagtctccacc acggtggattttccacaggacctagatttgacagagtacgcggcagatcaaggtggtagagtggtatacagtttatatgc agtcagtaatcacagtggtagtacacactcaggtcattatacagccacttgtaaacacccttacaacagggaatggaacc tgtttaatgatacaagggccagtaccagtagcgcagaccatgctgtgtccgctgaagcatatctacttttttatgagctc aaatcagggtcgtcacggttataa |
|
Protein
| Protein ID | pfu_aug2.0_952.1_08033.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08033.t1 MQLHTRLVSKSEILRYLMRGPVKATHDYSTSYGSTYGTSGAGTLGRHGSLTTNYTSSSGGSRPGSLRGRRSSSLANVNDG IDGLRITDIENDDAPIRSSRRTSRLDDSYLSSNVTPRGSRLESDSSDDIVKSDTLKRTNRTSGSLSRYSNRGKVGLRNLG NTCFMNSVLQCLSNTKYLLEYCLEDSFEKDKNTSTSSMRGSLITAYAKLMKDMWSDKDSYVSPNAFKTQIQRFAPRFMGY AQQDSQEFLRYLLEGLHEDVNRVTSKPKPVSIDDDKFSSDQEKAKEYWRVYLTYDNNLFVGQLRSTLKFDCGHASTTFDP FWDLSLPIPKGRYSDATIYKCINLFMKDEQLDHDELPVSNNKAKKRNISVSEAVCYPREHRYDVDLKRFSQGRYSQKVST TVDFPQDLDLTEYAADQGGRVVYSLYAVSNHSGSTHSGHYTATCKHPYNREWNLFNDTRASTSSADHAVSAEAYLLFYEL KSGSSRL |
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