Gene
| Gene Model ID | pfu_aug2.0_952.1_08034 |
|---|---|
| Locus | scaffold952.1 : 53714 ... 73315 : - |
| To GenomeBrowser | scaffold952.1:53714..73315 |
| Genes list of scaffold | scaffold952.1 |
| Synonym | pfu_aug1.0_3186.1_37529 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hmg box transcription factor bbx-like | GO:0044424 GO:0060348 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_952.1_08034.t1 | 1 | 1 | HMG_box | 11 | 79 | 2.5e-18 | 66.1 | 1.1e-21 | 5.5e-18 | 65.0 |
| pfu_aug2.0_952.1_08034.t1 | 1 | 1 | HMG_box_2 | 12 | 78 | 3.5e-09 | 36.9 | 1.7e-12 | 8.2e-09 | 35.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_952.1_08034.t1 | gi|524916005|ref|XP_005112786.1| | PREDICTED: mucin-19-like [Aplysia californica] | 4.0e-39 |
| pfu_aug2.0_952.1_08034.t1 | gi|268053977|gb|ACY92475.1| | BBX-like transcription factor [Saccoglossus kowalevskii] | 1.0e-35 |
| pfu_aug2.0_952.1_08034.t1 | gi|695160268|ref|XP_009508306.1| | PREDICTED: HMG box transcription factor BBX-like, partial [Phalacrocorax carbo] | 1.0e-34 |
| pfu_aug2.0_952.1_08034.t1 | gi|27696295|gb|AAH43817.1| | LOC398532 protein, partial [Xenopus laevis] | 4.0e-34 |
| pfu_aug2.0_952.1_08034.t1 | gi|12856747|dbj|BAB30768.1| | unnamed protein product [Mus musculus] | 6.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_952.1_08034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08034.t1 atggatgcctcggaggcagagaagaaggatataagacgtcccatgaatgcctttctgatattttgtaagcggcatcgtgc gatggtccgggaacgcaatccgaacatggataatcgcagcgtgacccgcattctgggagacttgtgggcacatctcgatg aagtggagaaaaccaagtacacagatctagctaaacagtataaagatgcatttatgaaggcaaatccagactacaaatgg cacaacccagaaaagttgaatggaccaatcatatttgccaaaccacagaccagaccaatcaaaatgaagggagaaaggga tgactcacctgaacaattacttactccagggaaactggcagatccaagtaatatgggcggactgagtcttctactgatgg ccggccaacagacgtcttctagcaaatccagcagtcatgtgacaccggccagttgtagcagcgtacctattgaaaaaact tccaaagccgatgacggaaaggttatcaaaacagaaatggaggaagaagaagaagtttctttgaaatgcgaagaaaagct gactgactatgattttgattccgaagagccttgtactgttggaaaatgccccgacgtgcaaagcgtcggagagttacaag tatcatcatttttttcaaaggaaaacatgcacttcagaacattttgccattctacaaaaataaaaagtgaaaaatatgac gatgatgatgaagaaaaaccattggtcatcgccatggaaacaaacaatggtagtaaagacaacagtaaaattaccattga aacaaataattggagcaaagatgacagtaaaattgccatggaaacaagtagtggcagcaaagacgagagtaaaactgtaa aggcaaaccctataacatgtggtaaggtagttatggatcacatcatagaccaactttatcacacgtcgaaatttggtagt cctaaacgaagcagcctgcaaacacaagcaggttctttaccctcgatgaatgacagaatcctgagaaattcagcaagtgg gaattttaaggacaggccatcggtcttcgaaaatctagtctgctcaagggaccagttagaaagaaagttacttcaagcga gttccgcaccttatacatccgtatactcagcaccgattgttgaaaaaatggatgaaataattgcagcaggcaaatatggt aaaaacaaaggaagaaaacgttgctactctgagagtgttgtaatgtccaaaagtgatagtctgaaaaatttggaacaaaa ggagataaagatagaagagtgtaagagtttagtagaccaggatgcatttcacaagacctctcgggatttggccagcgagg atcacatggagaatgacgaggatgaccaactcccggtaaggaagtcaaggcggcgtaaccgagggcaacggtaccaggag ctgatcaacgagggtatcatacagccatcaagggacagaatgtccggcaggaaacctgatcaaccctgtaaagaagacaa atttcaggaaatgacagagttatctacccctgatgatgacttgacaccagatgtcctgtcagtttaccctcgtcagatta ggaagaggactgtttcagaatcagaaagaggccgaattatggacgactcctgtagatataaaacaggtgactttgacctt gaggcccacattgccacacttccagcttgttcccttgaaaagatgagatcgaagaaaatctcggcaagggtgcgtaaccc aagtgagagtagctgtaggtcggcagatggcagcaccggcagcaaagacgaaatgaagacagaagtgatattgacgatgc cacctcacttgaagaacatggaaaaaccgactgggcctgtcacggggagtcgtaaacgtaaggctcggaaacactccatt actcgtctcacacccgttacagacaatactacgacaaaatgtacaacagtaccacagactgaggcaatttcatctgtaaa acaggttaaattgagtaatgaagtggggggaaatgcagctcaagaacatttgagaaaagagccgacgcaaatcagatttg gagtcaaaacagatggttcggaagcagaaaataatatgcagtgttatgacagaaaagaaacgagtatggcaaatgtcagt acagaaaaaagtatagaaacaatggataaggttgaaaatatgtgtacgggtaaatttccttcgggaaaaattgacgtcgc tggaacacaacaggcagatagggatgtccatctacatgtatgtgatgtcatcacaaaagacaacatgaaaacaaattttg attgtgatgatagcatgttgggagattctgaaaattttaccgattcaggatccaaagtaaattgttcaacggagtttgat aagagcaaagataaggtagacaaagttagaattgacgaagaaatctctactgagcacaattctggagaagagaaaagcca gacgggtaataaatggaatacaaatgcagtagtgaatgagaagaaaccaatgatggaagctttgtcgatttttgattctg caggagctgtccttaaagactgtgatattaatactgacggaactttaggatcaaccaaagacgatcttgagaaatcagaa ttaaatggaaactgtgatatcccaatagatgactgtgatgctgaaaattgcaaaaatgagaaaaattacaaaaatgacga aaattgcataaatgacgaaaaacaaattttgctatctgcctctaaagtacaacacgaaaatacgcaaatggaattacaag gatgttccgaatttatagcttcctccaaggaatcagaaggtggagatttgtctagatcttcacaaaatatctgtcattta ttagctccctctatgatgactccaggggcaggtaacccaagcacatttcaggaattaactactcctgcaatatttgaagg ggtagataactctagcttatttcaagaatctgtttctccttcgacaaaaattgaagcgggaaataacacaagcgtaattt cagaatgtgcttctccatctgaaatattaagtggagataactctagttcatcacaaaaatatataactccatctgtgaag tttgaaggggcagataactctagctcatcacaagaatatatacatgtaactccatctgagaagtttgaaggggctgataa ctcttgctcatcgcaagaattttcttcattttcacgtgcaggaagtcaggggcatggagattcatgtaaaattatttcgc ttgatattgcttgttcgcaggcgccacctggtggtgacagtatagtacaaaatgtaccgactactagctatcaattagga tatgtaaattcttaa |
|
Protein
| Protein ID | pfu_aug2.0_952.1_08034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08034.t1 MDASEAEKKDIRRPMNAFLIFCKRHRAMVRERNPNMDNRSVTRILGDLWAHLDEVEKTKYTDLAKQYKDAFMKANPDYKW HNPEKLNGPIIFAKPQTRPIKMKGERDDSPEQLLTPGKLADPSNMGGLSLLLMAGQQTSSSKSSSHVTPASCSSVPIEKT SKADDGKVIKTEMEEEEEVSLKCEEKLTDYDFDSEEPCTVGKCPDVQSVGELQVSSFFSKENMHFRTFCHSTKIKSEKYD DDDEEKPLVIAMETNNGSKDNSKITIETNNWSKDDSKIAMETSSGSKDESKTVKANPITCGKVVMDHIIDQLYHTSKFGS PKRSSLQTQAGSLPSMNDRILRNSASGNFKDRPSVFENLVCSRDQLERKLLQASSAPYTSVYSAPIVEKMDEIIAAGKYG KNKGRKRCYSESVVMSKSDSLKNLEQKEIKIEECKSLVDQDAFHKTSRDLASEDHMENDEDDQLPVRKSRRRNRGQRYQE LINEGIIQPSRDRMSGRKPDQPCKEDKFQEMTELSTPDDDLTPDVLSVYPRQIRKRTVSESERGRIMDDSCRYKTGDFDL EAHIATLPACSLEKMRSKKISARVRNPSESSCRSADGSTGSKDEMKTEVILTMPPHLKNMEKPTGPVTGSRKRKARKHSI TRLTPVTDNTTTKCTTVPQTEAISSVKQVKLSNEVGGNAAQEHLRKEPTQIRFGVKTDGSEAENNMQCYDRKETSMANVS TEKSIETMDKVENMCTGKFPSGKIDVAGTQQADRDVHLHVCDVITKDNMKTNFDCDDSMLGDSENFTDSGSKVNCSTEFD KSKDKVDKVRIDEEISTEHNSGEEKSQTGNKWNTNAVVNEKKPMMEALSIFDSAGAVLKDCDINTDGTLGSTKDDLEKSE LNGNCDIPIDDCDAENCKNEKNYKNDENCINDEKQILLSASKVQHENTQMELQGCSEFIASSKESEGGDLSRSSQNICHL LAPSMMTPGAGNPSTFQELTTPAIFEGVDNSSLFQESVSPSTKIEAGNNTSVISECASPSEILSGDNSSSSQKYITPSVK FEGADNSSSSQEYIHVTPSEKFEGADNSCSSQEFSSFSRAGSQGHGDSCKIISLDIACSQAPPGGDSIVQNVPTTSYQLG YVNS |
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