Gene
| Gene Model ID | pfu_aug2.0_952.1_08036 |
|---|---|
| Locus | scaffold952.1 : 141226 ... 180574 : + |
| To GenomeBrowser | scaffold952.1:141226..180574 |
| Genes list of scaffold | scaffold952.1 |
| Synonym | pfu_aug1.0_12219.1_39300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_952.1_08036.t1 | 2 | 1 | SH3_9 | 56 | 107 | 7.8e-15 | 54.1 | 1.8e-12 | 6.5e-09 | 35.2 |
| pfu_aug2.0_952.1_08036.t1 | 2 | 1 | SH3_2 | 56 | 109 | 5.6e-14 | 51.3 | 8.2e-11 | 3.0e-07 | 29.8 |
| pfu_aug2.0_952.1_08036.t1 | 2 | 1 | SH3_1 | 59 | 103 | 6.1e-09 | 35.1 | 4.8e-09 | 1.8e-05 | 24.0 |
| pfu_aug2.0_952.1_08036.t1 | 2 | 2 | SH3_9 | 137 | 173 | 7.8e-15 | 54.1 | 5.3e-07 | 0.002 | 17.7 |
| pfu_aug2.0_952.1_08036.t1 | 2 | 2 | SH3_2 | 138 | 175 | 5.6e-14 | 51.3 | 1.6e-07 | 0.00059 | 19.2 |
| pfu_aug2.0_952.1_08036.t1 | 2 | 2 | SH3_1 | 139 | 169 | 6.1e-09 | 35.1 | 0.00023 | 0.87 | 9.0 |
| pfu_aug2.0_952.1_08036.t1 | 1 | 1 | RhoGAP | 244 | 389 | 6.19934e-42 | 142.7 | 4.2039e-45 | 1.6e-41 | 141.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_952.1_08036.t1 | gi|524894202|ref|XP_005103603.1| | PREDICTED: mucin-19-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_952.1_08036.t1 | gi|642930820|ref|XP_008196102.1| | PREDICTED: GTPase-activating protein CdGAPr [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_952.1_08036.t1 | gi|242012537|ref|XP_002426989.1| | CDC42 GTPase-activating protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_952.1_08036.t1 | gi|617414611|ref|XP_007556525.1| | PREDICTED: rho GTPase-activating protein 32 isoform X2 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_952.1_08036.t1 | gi|736178727|ref|XP_010768023.1| | PREDICTED: rho GTPase-activating protein 32 isoform X2 [Notothenia coriiceps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_952.1_08036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08036.t1 atggaggaggtgctggcgtcgtacatggagaagctgtcagaactggctggtagtaacattaactgtggctctatactcaa ctggtttgagttagataaccgtggtaaccgactgttggtactagatgactccggtattaacactccagctatagcggctg ctcacgccgttaaacgatacacagcacaggccgtagatgaaatatcactcgaggtcggtgatatagtatctgtgattgac atgccccctcctgaggattctctatggtggagaggaaaacgaggctttgaggtcgggtttttccccagtgagtgtgtgga ggtgataggtgacaaagtacctgtttccatgcagactaatattccactcggctccagcagtaagaagccttgtaagcatg agtatatacccgtcggtgatatagtatcagtgattgacatgcctcctcctgaggattctctatggtggagaggaaaacga ggctttgaggtcgggtttttccccagtgagtgtgtggaggtgatcggtgacaaagtacctgtttccatgcagacaaatat tccactcggctccagcatagtgaggaagcatgggaagttcttatcattcctgaggatgtttttctcgacacgaccggcca ggatagaacttaaacaatctggtatcgtgaaggagagagtattcggctgtgacctcggagaacatcttctaaactcagga catgatgtacccctggttttgaagagttgttccgagatcatagaagaatacgggattgtagatggtatatatagactgtc aggcatcacgtccaatattcaaaaaatcaggcacgcgtttgacgaggacagagttcctgacttaacagaagaaatctacc tccaggacatacacagtataagttcacttctgaagatgtacttcagggaattacccaatcctctactcacctaccaactc tacgataaatttgccgatgcagtaagagatgaagataataagttatggaagatacatgatgtagtgcagcagctcccccc tccccattacaggacgacagagtttctgatgcgtcacctggcaaaagtagcagcattcggtactgagactggaatgcact ccaaaaacctggctatagtatgggcacccaacttactcaggtccaaggagttggagtgtggaggtggggctgcagctcta cagggagttggtatacaggctgtcgtcacggagtgtctgatactgtacgctgacctaatctttagtgacaaaatgccaaa ttactcctctccagagctcaaacaatccaggaagaagccgagacctaaatctcttgcgatttcgactccaaccaagctga tcacgctagaggaggcaagggagagagttctactgtccggtctccggccaccgtcccagcaatacatagatgtaggagga gggcccaaaaacctaccggacagatatcacactgttatagatctacccggatacaggaaaaagactcctttgagagaagt tggtaatattaagggcaagaaatccccaagcggctggaggtccatattcacaaagtccaatcgtcagggcagtgttaaac aaaaagccctcaagggcagtatgacagattccctgagtcaactggacaggaaggcgatcacggaggaagacgtacataac tggaaaaggcgacgattacgaggtgcgaagagtgcggaatctctcatcaatctgccatccgccaatcgggactccaccca tcgtatgtcacacttgatcgacgaaaacactctgatgaagatttactcagatgaaaatgcgaggtcaagtacacgtcata aacggtccttatcatctgagtcacctagaagtttgacatcaggagataactcagtgtcgtatccaagctttataatggca ggatctagggaagttcctatagacgttgatacttcagtcgtaccagatgaatccagtgcctccaactcagattctcctga tgtatctgcaaagaaaaaacagttgtttgtacgcaacgaaacaaaaagacgtgtcgtgactcctcggaaagtcccatcag ctccctctaccccacgttcagactcggaaaatagggaaaaaagctgcagtcctaaagctgccaaacaaaaaatgagttca agtgctatacatactgactctaaggagattaaaattgtgaaacaagatattgtgccaaatgccgctgactcggacaaatt tgtgttacgtgtcgaagacgcaaatttactgaaaccaaaggattccgtcacaaaaagtgctagtacctccaaagaggaag gacataaaggaaagggaacaaaaacgccacctagtggtagaaaggatgcacgaacaccttcacgagaaagaaggaaaagt gctgaagacaaaaagtctcatactcaagtgaaagaggccagtccaacagttcaaacggaaaaagtttctgataaaggtag agaaatgatgacgatagatttacctgaaagtccaggtgcaaaacgtaaaaattggatcggaagtactggatccaccccag cttctacacctgacgatccacctgtacataattatttctcacggcatcatgattacgccataattctctccgactccgag gatgtgcagaaaaaacctcttaatcaagagctgactgtagcggacaatattgatctgaatcgtttatcggatagttacga taatttagatcctatgttctttctcccacattctccaccagaccatgaaatggcgtctgaagtcaactctgaaccacgta aggaagaagtgcaatatgggaaaattcttagtaaaacatcttcgtcatttgatgatgctagatcaaaagaaaatacatgt ataccgtcatcaaaaatatcaaagtgtctcagtgtaccgtcagacattcaaaaatccttggaaaatatgacgtctggtag tcagactgatatgttatcgtccgtgactataagtgaagtgtcgtctcttgaaagttttaatcttcccgatgacggtaaag tgacccagcaacaaaaacgtcgcagtgcttccttggacagtttgacggagaaagactcacctcttacgcgcaccctcatt gagataaatgctcagattgatagggcatttaaaagtgaggtagaacgtgctcgacaaattaaaacagagcacaatcagca gcttctaaattctagtcatgacacaaatactctacgtagtgaatacgatgtgccgcagcttgaatcgcctggaacgtacg ataactgtatggacgatcagaacactggggtagaagtttttgaagctcctcgtttaattcgtgctccactgagaccagcc ggagctcagacacaaagtcaaaatgcaaaaattgtgaaacaaagctcttcagactcttccgtttccatggaaacatctca cacttctagtagtgcaatttcggaatctcatacaacacaagatgttcattcaatgcagtatttctctcaaagctcatctt cacaaatgtatgttcaaaaagcatttcaagggacgcaatactcagaatctatccatagttcagaaacacactcaaacagt caagtatctacaaatgtgcaatatgaccgactagatggaatagaacagtcagggagaattatgggtagttcatctacaag taattcctcagagaagataccatcacaaaattcattttctgaggagaaatttgcatcttacccatccagttcacctcaca gacctcagcagttcacagaatctcctatttattcaaaaatcagcaagcctcccattcacagccctccacttgggagcccc tcacagtctcagcaatctactcatcagagtcgtccccctacaaaagcaaattcagtacatgacagctcacaaaaatggtc aggtattacctcccctcagtcagcgccggaatcatcacccctcacaagtcccgttagtgtaatgagacgaccaaaatcca tacatcgtggctcctttggagcatcctcccctcaaggccaaggctggcctcttgcctcgccatcctctagtcctggtcag gcaaggtcaagttctagtcaaggaagctctccgtttatgagccctacaagtcctcagcagtcacgaggatttgacgtcag aaggagtcagtcaaggcacggacgagtcactcctgaatccagactcaaaaaggagaatgctgaaggttttcatccatcac aaccggctaaacgagaattccctcatcttctactgtcgtctgcaaagtcatgtgagacaagtggtacgtcaagtcctcga tcaccacggcaacaacctcgctgggaggatttagcgggactaaatcaggacttccgagccatggcaggtcttgatagggt gaattcttttgactcggtggaaagagaaaagcaacatctgacatcaagcaattcaaacattagctatcctgcagacaatt ttgttccaaggaatcgcagctctagcgactcctgtgtagtagaggacacgtcatttgagagaaaattacaggatttgtct gattttaacgaaatttggagaaagcagctagcacccactggagatgtctgcaggcatgctaacaaaagtgatacaagagc aaatgcaggaaacacaactgaacaaacaaggatgcaagctagtaaggaagagcaggtgtcaaatcgtagacatcagctcc gaaagtcatctacaatagctgccatggaaatggctgccgagtatactaatacccgccgtgaacgaacccccgagtgtggt atggaggagagggtgctagttgttgagaagcctatgattaaaaagtgtttgacagaatcggacattccacagataaaaca ttgtagcataatgactcaggatagcgctagtacgacatcttctagtggtacctcagacttacacagctttggtcacgata gttgtactggaggtaatgatagggagcaaaaggaagacgaagcaaaaaataaacgggactctgatgtgactatttatgaa aacgacccgttaccacctgatttagatataagagatttcgacactattggtgatgcatctgtaaacaggaatataacaac acagatcgacacgtctctgccaatgacagatgagttcgacatcaatgagagttgttttggaataccttcccatcagaacc tgtccaatgaaatgcgagaaaaagctcaggaaagacttcgagcatcacagcgacagctctatgataattgtatggattcc aatcttcaaggagtagaaacgctgccgttagatgcgcttgtatttccaactgctgtactaagagtgcaggatggtacagt ggtagtgcaggagcattctgaccaagctatgcatgggctgcaaggtgacatccagttacagaatcagatggattttgagg cgacgttacagtatgggagcggtgaagacgattacgtgtattctaacgaggatattcagatgttatcacagggtcctatt ctgacagcggaaccgttcatactggatcagctagagcctcataacaccgtatccaggcaagtagacaatacggaggaagc ggctcagaatgagatcaacgctgatagagagctgagtatgacgctacaaaactcactcaatcaggacgtcaaaggatggg aatatgaggatgtgtcgtgtcagaactcggcaaactcagctttgcaaaacccatcttgtccaaactcagatttgccaaac tcggctttgcacaactcaaatttgcaaaatttaccaacatctggtctgtcccatatgagacttgtatctcctgcagaagc atttatggatgttgatcatcaaagtcagtcgtgtgtagcgctacctgagcttgctccgcctcccagagagttcctagagg tcagtagaccaaaaatggtcaggaaaaatatacacctaaaagcacatcagaatcgtaaaccgcacagcacgggcgtctta gaggtatcgtctgataagggcgaaaatgaaatcctagttgagcaccgagcaagcttcaagaagaaagcacctgttcctct accaaaaacgaaatctctcggcagtagacctaaagaggaacttgtggatcctaatgacatcattgatgacgtttttgttg atgatgtcaaatcgacaatcacacagtctaggttattaaggagaccctgtggaagtctagctacgtttgtatttccgacg gtgatgccgtgcgagtcgtcaaatcgtagttcattagatgagagtgtgttacaaatggcgtcagacagacatgatgactt cacaggtgacgagtctgaaaatgaaaggagggaggatatacgatttacgcgtgcgcatcgctcaaccaagctacaaagtt tgaaggagttgtttgagaagtcatgtggtgaccaaaccttgaatgattctgaagaaaagttactgtgcttatcaaacact acaaaacaagagaacgattaccacattggtgctacatcttcagctcagacaatgatatctcaatctgagcgatctcatca ggaggtgttaaggaccagaagtagccctgtccacgatgccgccagccacactctacaaactagtctaaattcacctcgtt cacggcggagtatttcaacagacgtgggatatgaattcaggtcgactcgaggtgtgcccatgacgtcagcaaaacctcca aaacatcgcagctcctcaagaccaagaactccaagtgaatcgtctatgagtgagatagattcgaaatttgtcggaagcaa aggttcgccgaaatcaaatcgattagaagattcacagaggtccgccattgaaggttcatccagtacaaaaagttcaccga aatcacagagagatgcttctcctcttggttatatatccggggatgattcaccacgaagcgtcaggagcaggacggacggg tcaccaaaaggtattcgacatgtttctttcaaaagaactgaaagtttcgaacagatgtctccaaaaggacctcgatcatg gagcagtaatcgatctgttaccatagatacaggagatgtccaaccagaggagcgcatgtctcaatcttttggcgggaatc ttgcatggcagacgtcagagttatggcgcgcacagcgaagcagacgtgctatgtctgtagaaacaagtgaacaaagatcg aatgatttcatgagtaaatcactgactgatactcaaagtagtggatctgtattagaacgaaaaggaagtatcaaggaatt gatgaattttttcgaaagtaaaacagaaggtcaagggcatgacgatgatgccatggcaacggcagccatgacaacaagca tgcagagaagtcgtcaacgagtacacagtgtttcgccgacgtctggtttgggacaggcactctctcattctgccgaatct cttagtgtcaccaacatccgtcgcagtttagaactccctgctaacgtcgacattgacgatgacagcgtgggtcgacctca gtcagtaagggtgggtcctaaaccgttctatggttcacaactataa |
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Protein
| Protein ID | pfu_aug2.0_952.1_08036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_952.1_08036.t1 MEEVLASYMEKLSELAGSNINCGSILNWFELDNRGNRLLVLDDSGINTPAIAAAHAVKRYTAQAVDEISLEVGDIVSVID MPPPEDSLWWRGKRGFEVGFFPSECVEVIGDKVPVSMQTNIPLGSSSKKPCKHEYIPVGDIVSVIDMPPPEDSLWWRGKR GFEVGFFPSECVEVIGDKVPVSMQTNIPLGSSIVRKHGKFLSFLRMFFSTRPARIELKQSGIVKERVFGCDLGEHLLNSG HDVPLVLKSCSEIIEEYGIVDGIYRLSGITSNIQKIRHAFDEDRVPDLTEEIYLQDIHSISSLLKMYFRELPNPLLTYQL YDKFADAVRDEDNKLWKIHDVVQQLPPPHYRTTEFLMRHLAKVAAFGTETGMHSKNLAIVWAPNLLRSKELECGGGAAAL QGVGIQAVVTECLILYADLIFSDKMPNYSSPELKQSRKKPRPKSLAISTPTKLITLEEARERVLLSGLRPPSQQYIDVGG GPKNLPDRYHTVIDLPGYRKKTPLREVGNIKGKKSPSGWRSIFTKSNRQGSVKQKALKGSMTDSLSQLDRKAITEEDVHN WKRRRLRGAKSAESLINLPSANRDSTHRMSHLIDENTLMKIYSDENARSSTRHKRSLSSESPRSLTSGDNSVSYPSFIMA GSREVPIDVDTSVVPDESSASNSDSPDVSAKKKQLFVRNETKRRVVTPRKVPSAPSTPRSDSENREKSCSPKAAKQKMSS SAIHTDSKEIKIVKQDIVPNAADSDKFVLRVEDANLLKPKDSVTKSASTSKEEGHKGKGTKTPPSGRKDARTPSRERRKS AEDKKSHTQVKEASPTVQTEKVSDKGREMMTIDLPESPGAKRKNWIGSTGSTPASTPDDPPVHNYFSRHHDYAIILSDSE DVQKKPLNQELTVADNIDLNRLSDSYDNLDPMFFLPHSPPDHEMASEVNSEPRKEEVQYGKILSKTSSSFDDARSKENTC IPSSKISKCLSVPSDIQKSLENMTSGSQTDMLSSVTISEVSSLESFNLPDDGKVTQQQKRRSASLDSLTEKDSPLTRTLI EINAQIDRAFKSEVERARQIKTEHNQQLLNSSHDTNTLRSEYDVPQLESPGTYDNCMDDQNTGVEVFEAPRLIRAPLRPA GAQTQSQNAKIVKQSSSDSSVSMETSHTSSSAISESHTTQDVHSMQYFSQSSSSQMYVQKAFQGTQYSESIHSSETHSNS QVSTNVQYDRLDGIEQSGRIMGSSSTSNSSEKIPSQNSFSEEKFASYPSSSPHRPQQFTESPIYSKISKPPIHSPPLGSP SQSQQSTHQSRPPTKANSVHDSSQKWSGITSPQSAPESSPLTSPVSVMRRPKSIHRGSFGASSPQGQGWPLASPSSSPGQ ARSSSSQGSSPFMSPTSPQQSRGFDVRRSQSRHGRVTPESRLKKENAEGFHPSQPAKREFPHLLLSSAKSCETSGTSSPR SPRQQPRWEDLAGLNQDFRAMAGLDRVNSFDSVEREKQHLTSSNSNISYPADNFVPRNRSSSDSCVVEDTSFERKLQDLS DFNEIWRKQLAPTGDVCRHANKSDTRANAGNTTEQTRMQASKEEQVSNRRHQLRKSSTIAAMEMAAEYTNTRRERTPECG MEERVLVVEKPMIKKCLTESDIPQIKHCSIMTQDSASTTSSSGTSDLHSFGHDSCTGGNDREQKEDEAKNKRDSDVTIYE NDPLPPDLDIRDFDTIGDASVNRNITTQIDTSLPMTDEFDINESCFGIPSHQNLSNEMREKAQERLRASQRQLYDNCMDS NLQGVETLPLDALVFPTAVLRVQDGTVVVQEHSDQAMHGLQGDIQLQNQMDFEATLQYGSGEDDYVYSNEDIQMLSQGPI LTAEPFILDQLEPHNTVSRQVDNTEEAAQNEINADRELSMTLQNSLNQDVKGWEYEDVSCQNSANSALQNPSCPNSDLPN SALHNSNLQNLPTSGLSHMRLVSPAEAFMDVDHQSQSCVALPELAPPPREFLEVSRPKMVRKNIHLKAHQNRKPHSTGVL EVSSDKGENEILVEHRASFKKKAPVPLPKTKSLGSRPKEELVDPNDIIDDVFVDDVKSTITQSRLLRRPCGSLATFVFPT VMPCESSNRSSLDESVLQMASDRHDDFTGDESENERREDIRFTRAHRSTKLQSLKELFEKSCGDQTLNDSEEKLLCLSNT TKQENDYHIGATSSAQTMISQSERSHQEVLRTRSSPVHDAASHTLQTSLNSPRSRRSISTDVGYEFRSTRGVPMTSAKPP KHRSSSRPRTPSESSMSEIDSKFVGSKGSPKSNRLEDSQRSAIEGSSSTKSSPKSQRDASPLGYISGDDSPRSVRSRTDG SPKGIRHVSFKRTESFEQMSPKGPRSWSSNRSVTIDTGDVQPEERMSQSFGGNLAWQTSELWRAQRSRRAMSVETSEQRS NDFMSKSLTDTQSSGSVLERKGSIKELMNFFESKTEGQGHDDDAMATAAMTTSMQRSRQRVHSVSPTSGLGQALSHSAES LSVTNIRRSLELPANVDIDDDSVGRPQSVRVGPKPFYGSQL |
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